iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112162

Ensembl Protein ID

PGSC0003DMT400095220

UniProt Accession

M1DVU0; M1DVU0_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400044791	PGSC0003DMT400095220	PGSC0003DMT400095220

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	27.66	2.50e-01	33.10	IUUC-Cpo-021870

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDVKISKGKE KRICQVTWMR IMDLPLVIMI DILSRLPIKS IFRCKCVCKV WYNILYPDPL 60
FVLMYEKRSL KFPCILLSEG IGEHSLLELK EGYRYYYGRS KRPIPLIPKF HYPPGRVSLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGTCA AAATCTCTAA GGGTAAAGAA AAAAGAATCT GTCAAGTCAC GTGGATGAGG 60
ATTATGGATC TTCCATTGGT GATTATGATT GATATTCTTT CACGATTGCC AATCAAGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006527--F-box-assoc_dom_typ1
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom

PROSITE

Pfam

PF00646--F-box
PF07734--FBA_1

SMART

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002546	Amborella trichopoda	24.50	1.00e-11	62.40
IUUC-Apl-003298	Anas platyrhynchos	25.84	6.00e-03	33.50
IUUC-Aly-005842	Arabidopsis lyrata	28.57	5.00e-26	110.00
IUUC-Ago-007793	Ashbya gossypii	34.09	2.20e-02	33.10
IUUC-Bdi-014511	Brachypodium distachyon	25.70	3.00e-17	81.60
IUUC-Cpo-021870	Cavia porcellus	28.40	1.70e-01	28.90
IUUC-Cre-022826	Chlamydomonas reinhardtii	38.24	3.30e-01	30.40
IUUC-Dre-028495	Danio rerio	35.14	1.10e-01	31.20
IUUC-Lpe-050860	Leersia perrieri	30.30	6.00e-15	76.30
IUUC-Mga-059915	Meleagris gallopavo	26.97	1.00e-03	35.40
IUUC-Mlu-068204	Myotis lucifugus	32.26	3.00e-03	37.00
IUUC-Opr-070263	Ochotona princeps	37.84	5.80e-02	32.30
IUUC-Ogu-078502	Oryza glumaepatula	24.84	2.00e-14	72.40
IUUC-Oin-079714	Oryza indica	22.22	3.00e-04	38.90
IUUC-Ome-081354	Oryza meridionalis	25.76	8.00e-12	64.70
IUUC-Pop-100065	Populus trichocarpa	32.74	5.00e-30	124.00
IUUC-Ppe-102092	Prunus persica	29.26	2.00e-30	125.00
IUUC-Rno-105341	Rattus norvegicus	33.33	4.80e-02	32.70
IUUC-Sit-110556	Setaria italica	23.08	9.00e-11	61.20
IUUC-Sbi-113981	Sorghum bicolor	23.31	2.00e-13	69.70
IUUC-Tni-120685	Tetraodon nigroviridis	35.85	1.00e-03	37.00
IUUC-Tvi-122653	Trichoderma virens	35.00	5.40e-02	32.00
IUUC-Tae-122813	Triticum aestivum	22.63	4.00e-11	62.40
IUUC-Tur-126662	Triticum urartu	20.20	1.00e-07	50.10
IUUC-Xtr-132546	Xenopus tropicalis	40.54	7.00e-03	35.40

Created Date

25-Jun-2017