iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000007547.2	ENSLACT00000008596.1	ENSLACP00000008528.1
ENSLACG00000007547.2	ENSLACT00000008597.2	ENSLACP00000008529.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.90e-09	36.5	211	258

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr.ewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C + + +e  ++ C++  C  ewfH+ C++l+    +p+ + w+CpkCr 
   Q: 211  TYC-LCNQVSYGE--MIGCDNdeCPiEWFHFSCVGLN---HKPKGK-WYCPKCRG 258
           69*.*******99..******9**99***********...999997.******85 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MLSPANGEQI HVVNYVEDYL DSIESLPFDL QRNVSLMREI DAKYQEILKE LDEYYEKHKK 60
ETDPVQKRRL LHCIQRTLIR SQELGDEKIQ IVSQMVELVE NRTRQVDSHV ELFESCQDTN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGAATGTT TCCCAAGTGT TTGAAACTGG TATTTGGGTT TTCCACGTTG GATCAAGTGC 60
AGCACATACA GTAAATACTG TACTTCTGAG CGGAGGGAGA GAAAATCACC GAGCAGCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028643--ING1
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12998--ING

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification
GO:0008285--P:negative regulation of cell proliferation
GO:0010941--P:regulation of cell death

KEGG

lcm:102348591

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001945	Ailuropoda melanoleuca	89.61	8.00e-125	439.00
IUUC-Atr-002906	Amborella trichopoda	69.23	5.00e-27	114.00
IUUC-Apl-003910	Anas platyrhynchos	89.93	8.00e-126	442.00
IUUC-Aca-004874	Anolis carolinensis	89.29	7.00e-124	436.00
IUUC-Ame-011262	Astyanax mexicanus	66.90	1.00e-97	348.00
IUUC-Bta-013507	Bos taurus	83.76	1.00e-87	315.00
IUUC-Bdi-014504	Brachypodium distachyon	30.15	7.00e-32	130.00
IUUC-Bol-015245	Brassica oleracea	81.82	1.00e-28	119.00
IUUC-Bra-017027	Brassica rapa	81.82	1.00e-28	119.00
IUUC-Cja-018925	Callithrix jacchus	86.38	8.00e-121	426.00
IUUC-Cfa-020947	Canis familiaris	89.61	5.00e-124	436.00
IUUC-Cpo-022286	Cavia porcellus	85.59	4.00e-94	337.00
IUUC-Cre-022920	Chlamydomonas reinhardtii	30.04	7.00e-27	114.00
IUUC-Csa-023825	Chlorocebus sabaeus	86.02	3.00e-120	424.00
IUUC-Cho-024577	Choloepus hoffmanni	88.41	8.00e-96	342.00
IUUC-Cin-025479	Ciona intestinalis	37.94	5.00e-46	177.00
IUUC-Csv-026288	Ciona savignyi	38.17	6.00e-42	164.00
IUUC-Cne-027005	Cryptococcus neoformans	45.95	3.00e-16	79.00
IUUC-Dno-029834	Dasypus novemcinctus	91.04	2.00e-126	444.00
IUUC-Dor-030315	Dipodomys ordii	85.47	7.00e-104	370.00
IUUC-Dse-031323	Dothistroma septosporum	60.00	7.00e-18	85.90
IUUC-Dme-032200	Drosophila melanogaster	77.05	2.00e-30	125.00
IUUC-Ete-032408	Echinops telfairi	86.38	6.00e-92	330.00
IUUC-Eca-034244	Equus caballus	86.75	6.00e-96	343.00
IUUC-Fca-035391	Felis catus	84.17	3.00e-104	370.00
IUUC-Fal-036838	Ficedula albicollis	89.25	1.00e-125	442.00
IUUC-Fox-037925	Fusarium oxysporum	69.57	1.00e-19	90.50
IUUC-Gmo-038748	Gadus morhua	53.76	3.00e-77	281.00
IUUC-Gga-040619	Gallus gallus	89.61	2.00e-125	441.00
IUUC-Gac-041996	Gasterosteus aculeatus	63.96	1.00e-95	342.00
IUUC-Gma-044339	Glycine max	28.29	2.00e-27	115.00
IUUC-Ggo-045481	Gorilla gorilla	83.05	9.00e-94	337.00
IUUC-Hsa-046170	Homo sapiens	83.05	6.00e-94	337.00
IUUC-Hvu-047046	Hordeum vulgare	30.45	5.00e-28	117.00
IUUC-Itr-048440	Ictidomys tridecemlineatus	89.74	2.00e-98	350.00
IUUC-Lpe-050822	Leersia perrieri	73.77	4.00e-28	117.00
IUUC-Loc-052038	Lepisosteus oculatus	82.56	1.00e-103	369.00
IUUC-Laf-054126	Loxodonta africana	89.96	9.00e-125	439.00
IUUC-Mcc-055031	Macaca mulatta	83.83	1.00e-93	336.00
IUUC-Meu-056248	Macropus eugenii	89.08	9.00e-101	359.00
IUUC-Mga-059217	Meleagris gallopavo	88.84	4.00e-98	350.00
IUUC-Mmr-061581	Microcebus murinus	88.48	2.00e-102	364.00
IUUC-Mdo-062452	Monodelphis domestica	91.76	2.00e-128	451.00
IUUC-Mmu-063412	Mus musculus	88.89	3.00e-123	434.00
IUUC-Mac-064625	Musa acuminata	31.60	3.00e-33	134.00
IUUC-Mpu-066479	Mustela putorius furo	88.03	2.00e-97	348.00
IUUC-Mlu-067586	Myotis lucifugus	76.51	2.00e-114	405.00
IUUC-Nle-069122	Nomascus leucogenys	85.66	1.00e-119	422.00
IUUC-Opr-070835	Ochotona princeps	81.55	8.00e-83	299.00
IUUC-Ont-071606	Oreochromis niloticus	61.76	8.00e-91	326.00
IUUC-Oan-073023	Ornithorhynchus anatinus	88.17	4.00e-121	427.00
IUUC-Ocu-073779	Oryctolagus cuniculus	84.17	6.00e-91	326.00
IUUC-Obr-076266	Oryza brachyantha	32.09	8.00e-32	130.00
IUUC-Ogl-077118	Oryza glaberrima	31.58	3.00e-33	135.00
IUUC-Oin-079049	Oryza indica	32.83	1.00e-32	133.00
IUUC-Ome-081291	Oryza meridionalis	32.83	2.00e-33	135.00
IUUC-Oni-082218	Oryza nivara	32.83	1.00e-32	133.00
IUUC-Opu-084171	Oryza punctata	31.64	7.00e-32	130.00
IUUC-Osa-085563	Oryza sativa	32.83	2.00e-33	135.00
IUUC-Ola-086891	Oryzias latipes	66.43	8.00e-98	349.00
IUUC-Olu-087851	Ostreococcus lucimarinus	69.23	1.00e-19	89.70
IUUC-Oga-087954	Otolemur garnettii	87.81	2.00e-122	431.00
IUUC-Oar-090006	Ovis aries	86.02	8.00e-119	419.00
IUUC-Ptr-090589	Pan troglodytes	86.02	2.00e-120	424.00
IUUC-Pan-091896	Papio anubis	83.40	2.00e-93	335.00
IUUC-Psi-093266	Pelodiscus sinensis	92.11	4.00e-129	453.00
IUUC-Pma-094265	Petromyzon marinus	75.34	6.00e-34	135.00
IUUC-Ppa-096009	Physcomitrella patens	33.09	4.00e-27	114.00
IUUC-Pfo-097531	Poecilia formosa	62.66	2.00e-94	338.00
IUUC-Pab-098253	Pongo abelii	86.02	4.00e-120	423.00
IUUC-Ppe-101441	Prunus persica	29.28	4.00e-29	121.00
IUUC-Pva-102753	Pteropus vampyrus	77.99	2.00e-86	312.00
IUUC-Rno-105964	Rattus norvegicus	86.75	1.00e-87	315.00
IUUC-Sha-107270	Sarcophilus harrisii	91.76	9.00e-128	449.00
IUUC-Smo-109441	Selaginella moellendorffii	27.52	4.00e-30	124.00
IUUC-Sit-109827	Setaria italica	31.32	8.00e-31	126.00
IUUC-Sbi-114826	Sorghum bicolor	31.32	2.00e-30	125.00
IUUC-Sre-115124	Sporisorium reilianum	46.67	3.00e-21	97.10
IUUC-Tgu-116822	Taeniopygia guttata	89.61	8.00e-126	442.00
IUUC-Tru-118262	Takifugu rubripes	58.12	7.00e-77	280.00
IUUC-Tni-119980	Tetraodon nigroviridis	58.12	1.00e-84	305.00
IUUC-Tvi-122341	Trichoderma virens	62.50	3.00e-16	77.40
IUUC-Tbe-127558	Tupaia belangeri	36.61	1.00e-43	169.00
IUUC-Ttr-128672	Tursiops truncatus	85.11	1.00e-93	335.00
IUUC-Uma-129581	Ustilago maydis	57.14	4.00e-21	96.70
IUUC-Xtr-132200	Xenopus tropicalis	86.02	5.00e-118	416.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence