iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049280

Ensembl Protein ID

CAY71644

UniProt Accession

C4R7R9; C4R7R9_KOMPG

Genbank Protein ID

CAY71644.1

Protein Name

Poly(A)RNA binding protein involved in nuclear mRNA export

Genbank Nucleotide ID

FN392322

Gene Name

PAS_chr4_0394

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr4_0394	CAY71644	CAY71644

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	39.19	9.00e-108	385.00	IUUC-Sce-106429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MSYRGRGRGG YGRNQFNGGN NYSSHQSFAA QPSFTVEIRN WNNASKDDLV SFIARKTRIK 60
LQNVIVDHTG TIQATVNTQK DATDLVNWNG VKFAGQSLKI TANTSTNGNG NAGSPDTART 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTACA GAGGCAGAGG AAGAGGAGGT TATGGACGAA ATCAGTTCAA CGGAGGTAAT 60
AACTACTCGA GCCACCAATC CTTTGCAGCA CAACCCTCTT TTACTGTCGA AATAAGAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR032710--NTF2-like_dom
IPR018222--Nuclear_transport_factor_2_euk
IPR030217--NXF_fam
IPR005637--TAP_C_dom
IPR009060--UBA-like

PROSITE

PS50177--NTF2_DOMAIN
PS51281--TAP_C

Pfam

PF03943--TAP_C

SMART

SM00804--TAP_C

Gene Ontology

GO:0005634--C:nucleus
GO:0051028--P:mRNA transport

KEGG

ppa:PAS_chr4_0394

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001516	Ailuropoda melanoleuca	23.92	1.00e-19	89.40
IUUC-Apl-003526	Anas platyrhynchos	29.63	2.00e-03	33.50
IUUC-Aca-005187	Anolis carolinensis	26.78	5.00e-16	77.40
IUUC-Ath-007703	Arabidopsis thaliana	23.76	5.00e-03	33.90
IUUC-Ago-007780	Ashbya gossypii	38.79	1.00e-109	388.00
IUUC-Acl-008191	Aspergillus clavatus	28.57	3.00e-51	194.00
IUUC-Afl-008512	Aspergillus flavus	27.17	5.00e-53	200.00
IUUC-Afu-009048	Aspergillus fumigatus	28.01	2.00e-53	201.00
IUUC-Ani-009320	Aspergillus nidulans	28.18	1.00e-47	182.00
IUUC-Ang-009834	Aspergillus niger	26.79	9.00e-48	182.00
IUUC-Aor-010039	Aspergillus oryzae	26.63	2.00e-48	185.00
IUUC-Ate-010321	Aspergillus terreus	28.94	2.00e-46	178.00
IUUC-Ame-011034	Astyanax mexicanus	24.86	3.00e-18	84.70
IUUC-Bgr-012142	Blumeria graminis	27.38	6.00e-40	156.00
IUUC-Bta-013268	Bos taurus	23.87	6.00e-18	83.60
IUUC-Bci-013951	Botrytis cinerea	26.15	1.00e-41	162.00
IUUC-Bra-017214	Brassica rapa	48.00	7.10e-01	26.20
IUUC-Cja-019064	Callithrix jacchus	22.93	1.00e-17	82.40
IUUC-Cfa-020712	Canis familiaris	24.17	2.00e-20	91.70
IUUC-Cpo-021814	Cavia porcellus	22.93	1.00e-16	79.70
IUUC-Csa-023652	Chlorocebus sabaeus	23.35	1.00e-18	85.90
IUUC-Cho-024546	Choloepus hoffmanni	45.83	2.60e+00	23.50
IUUC-Cin-025669	Ciona intestinalis	22.34	5.00e-19	87.00
IUUC-Csv-025957	Ciona savignyi	24.06	5.00e-16	77.00
IUUC-Cgl-026395	Colletotrichum gloeosporioides	28.05	9.00e-41	159.00
IUUC-Cne-026967	Cryptococcus neoformans	24.64	1.00e-10	58.90
IUUC-Dre-028476	Danio rerio	27.17	4.00e-14	70.90
IUUC-Dno-029301	Dasypus novemcinctus	23.46	2.00e-18	85.10
IUUC-Dor-030764	Dipodomys ordii	23.14	6.00e-16	77.00
IUUC-Dse-031489	Dothistroma septosporum	27.18	2.00e-33	134.00
IUUC-Dme-031623	Drosophila melanogaster	21.15	2.00e-13	68.60
IUUC-Ete-032992	Echinops telfairi	23.48	5.00e-07	47.40
IUUC-Eca-033208	Equus caballus	23.25	7.00e-19	86.70
IUUC-Eeu-034759	Erinaceus europaeus	23.76	3.00e-17	81.60
IUUC-Fca-035671	Felis catus	23.97	2.00e-20	91.70
IUUC-Fox-037892	Fusarium oxysporum	29.28	5.00e-40	157.00
IUUC-Fso-038402	Fusarium solani	24.10	5.00e-37	147.00
IUUC-Gmo-039325	Gadus morhua	23.87	6.00e-08	50.40
IUUC-Ggr-039736	Gaeumannomyces graminis	27.79	8.00e-37	146.00
IUUC-Gga-040508	Gallus gallus	24.54	1.00e-18	85.90
IUUC-Gac-041798	Gasterosteus aculeatus	25.10	4.00e-21	94.40
IUUC-Ggo-044655	Gorilla gorilla	23.97	8.00e-19	86.70
IUUC-Hsa-047028	Homo sapiens	23.35	1.00e-18	85.90
IUUC-Hvu-047231	Hordeum vulgare	27.08	3.20e-01	28.90
IUUC-Itr-048415	Ictidomys tridecemlineatus	23.14	5.00e-20	90.50
IUUC-Lch-049501	Latimeria chalumnae	25.54	2.00e-21	95.10
IUUC-Lpe-051147	Leersia perrieri	35.90	1.10e-01	28.10
IUUC-Loc-052299	Lepisosteus oculatus	21.03	1.00e-08	52.80
IUUC-Lma-053307	Leptosphaeria maculans	24.54	4.00e-16	77.00
IUUC-Laf-053523	Loxodonta africana	23.25	3.00e-17	81.30
IUUC-Mcc-055389	Macaca mulatta	23.35	2.00e-18	85.50
IUUC-Meu-056620	Macropus eugenii	27.27	3.00e-05	40.80
IUUC-Mor-057232	Magnaporthe oryzae	26.27	9.00e-45	172.00
IUUC-Mpo-057539	Magnaporthe poae	28.85	8.00e-37	146.00
IUUC-Mla-059053	Melampsora laricipopulina	25.35	2.00e-36	144.00
IUUC-Mga-059220	Meleagris gallopavo	29.63	2.00e-03	33.90
IUUC-Mvi-060283	Microbotryum violaceum	23.70	5.00e-31	127.00
IUUC-Mmr-061583	Microcebus murinus	23.55	2.00e-18	85.50
IUUC-Mdo-062158	Monodelphis domestica	25.54	3.00e-18	84.70
IUUC-Mmu-064202	Mus musculus	22.98	2.00e-17	81.60
IUUC-Mpu-065730	Mustela putorius furo	23.97	9.00e-21	92.80
IUUC-Mlu-066975	Myotis lucifugus	23.05	2.00e-12	65.10
IUUC-Nfi-068368	Neosartorya fischeri	27.08	5.00e-50	190.00
IUUC-Ncr-068724	Neurospora crassa	26.12	9.00e-37	146.00
IUUC-Nle-069816	Nomascus leucogenys	23.14	7.00e-18	83.60
IUUC-Opr-070244	Ochotona princeps	24.81	5.00e-12	63.90
IUUC-Ont-072608	Oreochromis niloticus	24.74	2.00e-22	98.60
IUUC-Ocu-074226	Oryctolagus cuniculus	23.87	8.00e-21	93.20
IUUC-Oin-079175	Oryza indica	28.89	9.90e-01	25.40
IUUC-Ola-087008	Oryzias latipes	25.10	1.00e-21	95.90
IUUC-Oga-088317	Otolemur garnettii	23.76	3.00e-13	67.80
IUUC-Oar-089720	Ovis aries	23.97	5.00e-18	84.00
IUUC-Ptr-091148	Pan troglodytes	23.35	1.00e-18	85.90
IUUC-Pan-091764	Papio anubis	23.35	1.00e-18	85.90
IUUC-Psi-094071	Pelodiscus sinensis	21.33	1.00e-10	59.70
IUUC-Pno-095045	Phaeosphaeria nodorum	31.48	8.00e-19	85.50
IUUC-Ppa-095344	Physcomitrella patens	33.33	5.70e-02	31.20
IUUC-Pfo-096500	Poecilia formosa	25.10	4.00e-21	94.00
IUUC-Pab-098014	Pongo abelii	22.98	3.00e-17	81.30
IUUC-Pca-100121	Procavia capensis	22.68	8.00e-15	73.20
IUUC-Pva-102865	Pteropus vampyrus	23.71	1.00e-15	75.90
IUUC-Pgr-103333	Puccinia graminis	26.76	6.00e-31	127.00
IUUC-Ptt-103702	Puccinia triticina	24.26	3.00e-31	127.00
IUUC-Pte-104388	Pyrenophora teres	27.39	1.00e-12	65.10
IUUC-Pyt-104447	Pyrenophora triticirepentis	27.39	5.00e-13	66.20
IUUC-Rno-106100	Rattus norvegicus	22.22	7.00e-18	83.20
IUUC-Sce-106429	Saccharomyces cerevisiae	39.36	3.00e-110	390.00
IUUC-Sha-106834	Sarcophilus harrisii	23.51	4.00e-19	87.40
IUUC-Sja-107818	Schizosaccharomyces japonicus	32.12	1.00e-54	205.00
IUUC-Spo-108301	Schizosaccharomyces pombe	29.93	5.00e-67	246.00
IUUC-Ssl-108512	Sclerotinia sclerotiorum	27.72	1.00e-43	169.00
IUUC-Sit-110768	Setaria italica	31.71	1.10e+00	25.40
IUUC-Sar-112963	Sorex araneus	25.24	7.00e-14	70.10
IUUC-Sre-114950	Sporisorium reilianum	26.39	1.00e-36	145.00
IUUC-Ssc-116010	Sus scrofa	24.07	1.00e-18	85.90
IUUC-Tgu-116603	Taeniopygia guttata	28.40	7.00e-03	32.30
IUUC-Tru-118148	Takifugu rubripes	24.59	3.00e-22	98.20
IUUC-Tsy-119506	Tarsius syrichta	27.59	3.00e-03	33.10
IUUC-Tre-121894	Trichoderma reesei	25.68	2.00e-43	168.00
IUUC-Tvi-122501	Trichoderma virens	26.01	5.00e-45	173.00
IUUC-Tae-123602	Triticum aestivum	29.79	1.50e-01	30.00
IUUC-Tme-127084	Tuber melanosporum	28.43	2.00e-61	228.00
IUUC-Tbe-127980	Tupaia belangeri	25.19	2.00e-09	53.90
IUUC-Ttr-128656	Tursiops truncatus	23.86	1.00e-12	65.90
IUUC-Uma-129530	Ustilago maydis	26.50	9.00e-38	149.00
IUUC-Vda-129709	Verticillium dahliae	27.44	8.00e-34	136.00
IUUC-Vpa-130739	Vicugna pacos	28.65	4.00e-07	47.40
IUUC-Xtr-132404	Xenopus tropicalis	24.46	4.00e-17	80.90
IUUC-Xma-133051	Xiphophorus maculatus	25.10	5.00e-21	94.00
IUUC-Yli-134681	Yarrowia lipolytica	35.27	2.00e-92	330.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence