iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099416

Ensembl Protein ID

POPTR_0008s11840.1

UniProt Accession

B9HJ19; B9HJ19_POPTR

Genbank Protein ID

EEE89760.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_873811; POPTR_0008s11840g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s11840	POPTR_0008s11840.1	POPTR_0008s11840.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	3.80e-24	85.2	105	146
ULD/UDP/UBQ/UBQ_PIM	1.10e-23	84.0	1	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e +++q+ +MG   +dr+++++aLraa+nn+e+A+eyL++g
   Q: 105  LEVAVQQILDMGggtWDRDTVVRALRAAYNNPERAIEYLYSG 146
           6889***********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktlkg++f +ev+++dtv+++K+ki++ +g   +p+eqq LI+++k+LkD+ttL e++i ++s+v+++++k
   Q: 1    MRIFVKTLKGSTFDIEVKPEDTVADVKKKIETAQGvavYPAEQQMLIHQAKVLKDNTTLDENKIVENSFVVIMLSK 76
           99*********************************99999*********************************987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MRIFVKTLKG STFDIEVKPE DTVADVKKKI ETAQGVAVYP AEQQMLIHQA KVLKDNTTLD 60
ENKIVENSFV VIMLSKVRFA SLVLSFESYY VYGQAASSLV AGSNLEVAVQ QILDMGGGTW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTGGGTA CAGTAGCAGC ATATACATAT ATATATAAAA CCCTTGCGGA TCGGAGAGTA 60
GAAACTCGAA GTCGAGAGTG GAGATCGCGA ATAAGACAAA GAAAGAAGGA TGAGGATTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0008s11840g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003116	Amborella trichopoda	82.21	4.00e-104	370.00
IUUC-Acl-008212	Aspergillus clavatus	37.70	3.00e-27	115.00
IUUC-Cel-018364	Caenorhabditis elegans	25.56	1.00e-18	87.00
IUUC-Csa-023183	Chlorocebus sabaeus	39.26	9.00e-34	136.00
IUUC-Cho-024814	Choloepus hoffmanni	44.27	3.00e-19	88.60
IUUC-Cgl-026495	Colletotrichum gloeosporioides	46.46	2.00e-17	82.80
IUUC-Dor-030358	Dipodomys ordii	39.26	2.00e-33	135.00
IUUC-Eca-034243	Equus caballus	37.80	2.00e-32	132.00
IUUC-Gga-040133	Gallus gallus	40.25	4.00e-25	108.00
IUUC-Gma-044370	Glycine max	84.43	1.00e-115	409.00
IUUC-Kpa-049314	Komagataella pastoris	28.65	5.00e-34	137.00
IUUC-Loc-051748	Lepisosteus oculatus	38.43	1.00e-32	132.00
IUUC-Laf-054293	Loxodonta africana	37.80	3.00e-30	125.00
IUUC-Mcc-055860	Macaca mulatta	39.26	9.00e-34	136.00
IUUC-Meu-056459	Macropus eugenii	40.74	5.00e-36	144.00
IUUC-Mpo-057609	Magnaporthe poae	48.44	4.00e-21	94.70
IUUC-Mtr-058713	Medicago truncatula	62.47	1.00e-120	425.00
IUUC-Obr-076631	Oryza brachyantha	67.83	2.00e-81	295.00
IUUC-Oga-088023	Otolemur garnettii	36.14	6.00e-31	127.00
IUUC-Oar-090387	Ovis aries	38.84	6.00e-32	130.00
IUUC-Pan-092140	Papio anubis	39.26	1.00e-33	136.00
IUUC-Ppa-095964	Physcomitrella patens	62.10	7.00e-73	266.00
IUUC-Sja-107851	Schizosaccharomyces japonicus	32.72	4.00e-39	154.00
IUUC-Tru-117920	Takifugu rubripes	40.17	4.00e-43	168.00
IUUC-Tvi-122617	Trichoderma virens	33.96	2.00e-35	142.00
IUUC-Tbe-127493	Tupaia belangeri	44.27	6.00e-19	87.80
IUUC-Ttr-128464	Tursiops truncatus	37.80	2.00e-32	132.00
IUUC-Vda-129946	Verticillium dahliae	50.40	2.00e-22	99.80
IUUC-Xtr-132679	Xenopus tropicalis	36.40	2.00e-22	99.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence