iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__4063__AT1G49780.1	fgenesh2_kg.1__4063__AT1G49780.1	fgenesh2_kg.1__4063__AT1G49780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.30e-33	114.8	13	86

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p +f+CpIsl+lM+dPv++++G+tydr+sI  w+a g++tcPvtr  l++ +l+Pn+tlrrliq+wc +n+s
   Q: 13   QIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLRRLIQEWCVANRS 86
           5899******************************************************************9986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MPGNLEPLDL GIQIPYHFRC PISLDLMSDP VTISTGQTYD RTSIDSWIAM GNTTCPVTRV 60
ALSDFTLIPN HTLRRLIQEW CVANRSNGVE RIPTPKQPAD PISVRSLLSQ ASAVTGTHVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAATG CCGGGGAATT TAGAGCCATT GGATCTCGGA ATCCAAATAC CATACCATTT 60
CAGATGCCCA ATCTCACTTG ACCTAATGTC CGATCCCGTA ACCATCTCCA CCGGCCAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

aly:ARALYDRAFT_474109

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000645	Aegilops tauschii	44.42	5.00e-70	257.00
IUUC-Atr-002952	Amborella trichopoda	51.52	9.00e-99	353.00
IUUC-Ath-007142	Arabidopsis thaliana	98.34	0.00e+00	722.00
IUUC-Bdi-014994	Brachypodium distachyon	41.98	7.00e-60	223.00
IUUC-Bol-015328	Brassica oleracea	87.00	0.00e+00	628.00
IUUC-Bra-017765	Brassica rapa	90.07	0.00e+00	659.00
IUUC-Gma-044197	Glycine max	65.96	1.00e-149	522.00
IUUC-Hvu-047378	Hordeum vulgare	43.97	4.00e-70	258.00
IUUC-Lpe-050781	Leersia perrieri	60.37	9.00e-52	196.00
IUUC-Mtr-058307	Medicago truncatula	65.38	2.00e-136	478.00
IUUC-Mac-064526	Musa acuminata	45.60	2.00e-55	209.00
IUUC-Oba-075168	Oryza barthii	72.41	5.00e-45	172.00
IUUC-Obr-076528	Oryza brachyantha	75.24	7.00e-45	174.00
IUUC-Ogl-077566	Oryza glaberrima	59.04	2.00e-48	185.00
IUUC-Ogu-078818	Oryza glumaepatula	59.04	4.00e-48	184.00
IUUC-Oin-079962	Oryza indica	59.04	3.00e-46	181.00
IUUC-Oni-082172	Oryza nivara	59.04	3.00e-48	185.00
IUUC-Opu-083930	Oryza punctata	60.71	1.00e-51	196.00
IUUC-Oru-084509	Oryza rufipogon	59.04	3.00e-48	185.00
IUUC-Osa-085902	Oryza sativa	59.04	3.00e-48	185.00
IUUC-Pop-100012	Populus trichocarpa	68.25	2.00e-148	518.00
IUUC-Ppe-101571	Prunus persica	66.82	3.00e-136	477.00
IUUC-Smo-108904	Selaginella moellendorffii	44.88	8.00e-71	259.00
IUUC-Sit-110186	Setaria italica	59.12	4.00e-48	184.00
IUUC-Sly-111810	Solanum lycopersicum	65.80	7.00e-141	493.00
IUUC-Stu-112274	Solanum tuberosum	65.56	1.00e-139	488.00
IUUC-Sbi-114366	Sorghum bicolor	59.39	2.00e-51	195.00
IUUC-Tca-121177	Theobroma cacao	68.25	1.00e-160	558.00
IUUC-Tae-123086	Triticum aestivum	44.42	5.00e-70	257.00
IUUC-Tur-126112	Triticum urartu	44.42	6.00e-70	257.00
IUUC-Uma-129520	Ustilago maydis	34.88	5.00e-06	44.70
IUUC-Vvi-131329	Vitis vinifera	66.98	3.00e-144	503.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence