iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129735

Ensembl Protein ID

EGY17584

UniProt Accession

G2WTZ3; G2WTZ3_VERDV

Genbank Protein ID

EGY17584.1

Protein Name

DNA repair protein RAD16

Genbank Nucleotide ID

DS572696

Gene Name

VDAG_01266

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_01266	EGY17584	EGY17584

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	51.86	0.00e+00	718.00	IUUC-Sce-106159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MAPRKTRTSA AHSLASRIET PESSRSRRMT RSTSTQNLSS AVSPPPVDAI EPLSVAVRGS 60
KSTTSASTSA TFTSASEAST PATSHEVTPA PPAADEKSAS SRPMMSRLEV QIPVMERAPS 120

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Nucleotide Sequence
(Fasta)

ATGGCGCCTC GCAAAACCCG CACCTCAGCC GCGCACTCTC TTGCGTCCAG GATCGAGACC 60
CCTGGTGAGT ACTGTTGACC CCCGCACCAT GTAGTCCCCT TTTGCTCAGC ACCACTTACA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF00176--SNF2_N
PF00097--zf-C3HC4

SMART

SM00487--DEXDc
SM00490--HELICc
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0008270--F:zinc ion binding

KEGG

vda:VDAG_01266

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000449	Aegilops tauschii	41.80	8.00e-113	399.00
IUUC-Atr-002602	Amborella trichopoda	42.74	2.00e-110	391.00
IUUC-Aly-005572	Arabidopsis lyrata	40.96	1.00e-117	415.00
IUUC-Ath-007571	Arabidopsis thaliana	42.17	1.00e-120	425.00
IUUC-Ago-007980	Ashbya gossypii	51.71	0.00e+00	699.00
IUUC-Acl-008061	Aspergillus clavatus	65.06	0.00e+00	904.00
IUUC-Afl-008389	Aspergillus flavus	65.53	0.00e+00	908.00
IUUC-Afu-008775	Aspergillus fumigatus	63.98	0.00e+00	884.00
IUUC-Ani-009475	Aspergillus nidulans	67.96	7.00e-157	546.00
IUUC-Ang-009813	Aspergillus niger	65.22	0.00e+00	913.00
IUUC-Aor-009994	Aspergillus oryzae	65.53	0.00e+00	904.00
IUUC-Ate-010405	Aspergillus terreus	66.30	0.00e+00	922.00
IUUC-Bgr-012279	Blumeria graminis	68.54	0.00e+00	939.00
IUUC-Bci-013844	Botrytis cinerea	72.74	0.00e+00	981.00
IUUC-Bdi-015009	Brachypodium distachyon	42.02	4.00e-113	400.00
IUUC-Bol-016388	Brassica oleracea	38.98	2.00e-126	446.00
IUUC-Bra-017729	Brassica rapa	37.56	3.00e-127	447.00
IUUC-Cgl-026730	Colletotrichum gloeosporioides	76.83	0.00e+00	1068.00
IUUC-Cne-026934	Cryptococcus neoformans	47.09	3.00e-165	574.00
IUUC-Cme-027241	Cyanidioschyzon merolae	43.18	3.00e-35	142.00
IUUC-Dse-031540	Dothistroma septosporum	65.47	0.00e+00	894.00
IUUC-Fox-037709	Fusarium oxysporum	74.81	0.00e+00	1017.00
IUUC-Fso-038218	Fusarium solani	76.05	0.00e+00	1061.00
IUUC-Ggr-040094	Gaeumannomyces graminis	70.45	0.00e+00	957.00
IUUC-Gma-042935	Glycine max	42.05	9.00e-120	422.00
IUUC-Hvu-047660	Hordeum vulgare	42.34	1.00e-113	401.00
IUUC-Kpa-049222	Komagataella pastoris	51.78	0.00e+00	710.00
IUUC-Lpe-050970	Leersia perrieri	39.68	4.00e-100	357.00
IUUC-Lma-053125	Leptosphaeria maculans	66.36	0.00e+00	919.00
IUUC-Meu-056270	Macropus eugenii	28.21	1.00e-51	196.00
IUUC-Mor-056942	Magnaporthe oryzae	70.92	0.00e+00	984.00
IUUC-Mpo-057611	Magnaporthe poae	70.45	0.00e+00	966.00
IUUC-Mtr-058123	Medicago truncatula	37.04	2.00e-123	435.00
IUUC-Mla-059170	Melampsora laricipopulina	46.65	7.00e-180	622.00
IUUC-Mvi-060400	Microbotryum violaceum	46.78	0.00e+00	641.00
IUUC-Mdo-062919	Monodelphis domestica	28.93	5.00e-56	211.00
IUUC-Nfi-068347	Neosartorya fischeri	65.99	0.00e+00	922.00
IUUC-Ncr-068941	Neurospora crassa	75.12	0.00e+00	1057.00
IUUC-Obr-076549	Oryza brachyantha	42.28	1.00e-113	401.00
IUUC-Ogl-077889	Oryza glaberrima	41.38	5.00e-111	393.00
IUUC-Ogu-078593	Oryza glumaepatula	39.59	1.00e-103	369.00
IUUC-Oin-080110	Oryza indica	37.06	3.00e-86	311.00
IUUC-Olo-080282	Oryza longistaminata	37.82	1.00e-99	355.00
IUUC-Ome-081180	Oryza meridionalis	37.18	2.00e-96	344.00
IUUC-Oni-082941	Oryza nivara	39.59	9.00e-104	369.00
IUUC-Opu-083720	Oryza punctata	37.78	2.00e-92	331.00
IUUC-Oru-085272	Oryza rufipogon	37.14	1.00e-92	332.00
IUUC-Osa-085537	Oryza sativa	41.38	3.00e-111	394.00
IUUC-Olu-087669	Ostreococcus lucimarinus	39.84	1.00e-112	399.00
IUUC-Pno-094792	Phaeosphaeria nodorum	65.69	0.00e+00	920.00
IUUC-Pop-099503	Populus trichocarpa	42.66	2.00e-116	411.00
IUUC-Ppe-102071	Prunus persica	40.57	3.00e-117	414.00
IUUC-Pgr-103403	Puccinia graminis	46.99	0.00e+00	629.00
IUUC-Ptt-103966	Puccinia triticina	46.51	2.00e-173	601.00
IUUC-Pte-104264	Pyrenophora teres	66.36	0.00e+00	920.00
IUUC-Pyt-104815	Pyrenophora triticirepentis	66.36	0.00e+00	920.00
IUUC-Sce-106159	Saccharomyces cerevisiae	51.86	0.00e+00	718.00
IUUC-Sja-107959	Schizosaccharomyces japonicus	51.08	0.00e+00	683.00
IUUC-Spo-108338	Schizosaccharomyces pombe	50.16	0.00e+00	662.00
IUUC-Ssl-108523	Sclerotinia sclerotiorum	72.01	0.00e+00	974.00
IUUC-Smo-109139	Selaginella moellendorffii	38.13	4.00e-120	423.00
IUUC-Sit-110565	Setaria italica	41.77	2.00e-112	398.00
IUUC-Sly-111735	Solanum lycopersicum	36.99	1.00e-123	435.00
IUUC-Stu-112856	Solanum tuberosum	41.38	8.00e-114	402.00
IUUC-Sbi-114800	Sorghum bicolor	35.88	1.00e-121	429.00
IUUC-Sre-114938	Sporisorium reilianum	49.16	0.00e+00	644.00
IUUC-Tca-121230	Theobroma cacao	40.96	3.00e-115	407.00
IUUC-Tre-122065	Trichoderma reesei	77.60	0.00e+00	1078.00
IUUC-Tvi-122398	Trichoderma virens	77.45	0.00e+00	1085.00
IUUC-Tae-125864	Triticum aestivum	42.00	6.00e-114	403.00
IUUC-Tur-126489	Triticum urartu	38.14	5.00e-89	320.00
IUUC-Uma-129441	Ustilago maydis	49.01	0.00e+00	647.00
IUUC-Vvi-131253	Vitis vinifera	42.14	4.00e-117	414.00
IUUC-Yli-134350	Yarrowia lipolytica	50.85	0.00e+00	692.00
IUUC-Zma-135113	Zea mays	41.24	3.00e-108	384.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence