iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049274

Ensembl Protein ID

CAY68111

UniProt Accession

C4QXY8; C4QXY8_KOMPG

Genbank Protein ID

CAY68111.1

Protein Name

WD-repeat protein involved in ribosome biogenesis

Genbank Nucleotide ID

FN392319

Gene Name

PAS_chr1-4_0276

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-4_0276	CAY68111	CAY68111

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-57	184.5	178	214
UBD/Beta-Prp	9.70e-73	243.0	131	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gHt++v c+a+   ++ +++Gs D+t+++WD+ +g++
   Q: 178  GHTNWVLCVAWspLGDVIATGSMDNTVRLWDPISGKP 214
           8**********853389**************877765 PP

UBD/Beta-Prp

   S: 88   htlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls 187
            t++gh +++l+ +f p +++k+v+G  d+t+r+wd +t++  + tl+gh+ +v cv+++p g+++++Gs D+tvrlWd  +gk + +  +gh + v sls
   Q: 131  ATISGHGSTILCSQFAPhTSSKMVTGAGDSTARIWDCNTQTIQH-TLKGHTNWVLCVAWSPLGDVIATGSMDNTVRLWDPISGKPIGDALKGHGKWVSSLS 230
           46778888888888888555888888888888888888888888.88888888888888888888888888888888888888888777666888888888 PP
   S: 188  fdsng.......kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssv 267
           +++         ++l sgs+dgtvk+wd  + + ++t+ gh++ v +v+ s  +  ++sgs+D++i+ W  r g ++ t+  h++ +
   Q: 231  WEPIHlvkvgsrPRLCSGSKDGTVKVWDTVARNAMYTMSGHSSSVACVKWS-GSGVIYSGSHDKTIKGW--REGRCVATFRAHAHWI 314
           777666666677888888888888888888888888888888888888888.88888888888888888..8888888888877333 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MATLLPPPSK KQKRAAQLPV EVDIIPKDLP NVLIKFQASD TGDSIGGSIR VPGNISERQL 60
EELLNNLHKT SDDPVPYSFS LLGDKDDLVD IRDNLYTSVL KPGIKSTEDF LTLVYTPRAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTACGC TACTCCCTCC GCCTTCTAAG AAGCAAAAAA GAGCAGCTCA GCTGCCCGTA 60
GAAGTTGACA TTATTCCCAA AGATCTTCCT AATGTGTTAA TCAAGTTTCA AGCATCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR012972--NLE
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus

KEGG

ppa:PAS_chr1-4_0276

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	46.54	1.00e-130	457.00
IUUC-Aml-001793	Ailuropoda melanoleuca	44.38	2.00e-126	443.00
IUUC-Atr-002507	Amborella trichopoda	45.77	7.00e-131	458.00
IUUC-Apl-003964	Anas platyrhynchos	47.64	3.00e-126	442.00
IUUC-Aca-005354	Anolis carolinensis	26.98	5.00e-34	136.00
IUUC-Aly-006396	Arabidopsis lyrata	45.99	2.00e-125	440.00
IUUC-Ath-007278	Arabidopsis thaliana	46.20	3.00e-125	439.00
IUUC-Ago-007951	Ashbya gossypii	67.12	0.00e+00	731.00
IUUC-Acl-008298	Aspergillus clavatus	55.03	6.00e-157	545.00
IUUC-Afl-008581	Aspergillus flavus	60.16	1.00e-125	440.00
IUUC-Afu-008906	Aspergillus fumigatus	54.94	2.00e-155	539.00
IUUC-Ani-009189	Aspergillus nidulans	54.46	3.00e-150	522.00
IUUC-Ang-009630	Aspergillus niger	54.37	4.00e-160	555.00
IUUC-Aor-010038	Aspergillus oryzae	54.58	5.00e-164	568.00
IUUC-Ate-010278	Aspergillus terreus	54.93	7.00e-161	558.00
IUUC-Ame-011890	Astyanax mexicanus	46.22	2.00e-128	449.00
IUUC-Bgr-012011	Blumeria graminis	51.23	3.00e-148	516.00
IUUC-Bta-012964	Bos taurus	44.69	3.00e-128	449.00
IUUC-Bci-013592	Botrytis cinerea	52.54	2.00e-143	499.00
IUUC-Bdi-015035	Brachypodium distachyon	47.58	7.00e-132	461.00
IUUC-Bol-015501	Brassica oleracea	44.44	9.00e-125	437.00
IUUC-Bra-017642	Brassica rapa	44.24	3.00e-124	436.00
IUUC-Cel-018430	Caenorhabditis elegans	46.07	1.00e-124	437.00
IUUC-Cja-019125	Callithrix jacchus	44.67	2.00e-127	447.00
IUUC-Cfa-021013	Canis familiaris	45.98	1.00e-121	427.00
IUUC-Cpo-021743	Cavia porcellus	44.15	7.00e-126	441.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	40.23	1.00e-101	360.00
IUUC-Csa-024270	Chlorocebus sabaeus	43.90	6.00e-127	445.00
IUUC-Cin-025795	Ciona intestinalis	45.86	9.00e-129	451.00
IUUC-Csv-025953	Ciona savignyi	46.60	3.00e-128	449.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	46.56	3.00e-120	422.00
IUUC-Cne-026901	Cryptococcus neoformans	46.08	1.00e-134	471.00
IUUC-Cme-027281	Cyanidioschyzon merolae	41.83	6.00e-99	352.00
IUUC-Dre-028515	Danio rerio	46.63	4.00e-128	449.00
IUUC-Dno-029596	Dasypus novemcinctus	45.19	3.00e-127	446.00
IUUC-Dor-030494	Dipodomys ordii	44.88	2.00e-128	450.00
IUUC-Dse-031538	Dothistroma septosporum	51.64	1.00e-145	507.00
IUUC-Dme-031974	Drosophila melanogaster	40.63	1.00e-112	397.00
IUUC-Ete-032948	Echinops telfairi	54.03	4.00e-68	249.00
IUUC-Eca-033399	Equus caballus	44.24	1.00e-125	440.00
IUUC-Eeu-035013	Erinaceus europaeus	53.55	9.00e-67	245.00
IUUC-Fca-035860	Felis catus	44.67	8.00e-127	444.00
IUUC-Fal-037069	Ficedula albicollis	54.88	5.00e-80	288.00
IUUC-Fox-038059	Fusarium oxysporum	50.77	3.00e-137	479.00
IUUC-Fso-038445	Fusarium solani	50.38	5.00e-136	475.00
IUUC-Gmo-039319	Gadus morhua	46.19	6.00e-121	425.00
IUUC-Ggr-040095	Gaeumannomyces graminis	50.28	7.00e-144	501.00
IUUC-Gga-040303	Gallus gallus	56.91	4.00e-81	291.00
IUUC-Gac-042267	Gasterosteus aculeatus	47.96	1.00e-125	440.00
IUUC-Gma-043974	Glycine max	44.22	1.00e-126	444.00
IUUC-Ggo-044637	Gorilla gorilla	44.72	8.00e-126	441.00
IUUC-Hsa-046128	Homo sapiens	43.82	7.00e-128	448.00
IUUC-Hvu-047373	Hordeum vulgare	46.85	6.00e-130	455.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	44.33	9.00e-127	444.00
IUUC-Lch-049907	Latimeria chalumnae	44.62	8.00e-121	424.00
IUUC-Lpe-050778	Leersia perrieri	45.83	3.00e-113	399.00
IUUC-Loc-051889	Lepisosteus oculatus	44.35	1.00e-123	434.00
IUUC-Lma-053041	Leptosphaeria maculans	50.20	6.00e-138	482.00
IUUC-Laf-053598	Loxodonta africana	44.00	2.00e-127	447.00
IUUC-Mcc-055660	Macaca mulatta	43.90	7.00e-127	444.00
IUUC-Meu-056197	Macropus eugenii	50.00	1.00e-107	380.00
IUUC-Mor-056949	Magnaporthe oryzae	48.31	4.00e-134	469.00
IUUC-Mpo-057571	Magnaporthe poae	56.11	9.00e-67	245.00
IUUC-Mtr-058530	Medicago truncatula	47.22	3.00e-125	439.00
IUUC-Mla-059133	Melampsora laricipopulina	46.32	3.00e-126	443.00
IUUC-Mga-059252	Meleagris gallopavo	51.61	4.00e-111	392.00
IUUC-Mvi-060522	Microbotryum violaceum	46.21	8.00e-137	478.00
IUUC-Mmr-061117	Microcebus murinus	43.74	6.00e-127	445.00
IUUC-Mdo-062892	Monodelphis domestica	45.19	7.00e-127	445.00
IUUC-Mmu-064108	Mus musculus	44.22	8.00e-122	428.00
IUUC-Mac-064430	Musa acuminata	46.50	5.00e-129	452.00
IUUC-Mpu-065882	Mustela putorius furo	44.58	5.00e-126	442.00
IUUC-Mlu-068123	Myotis lucifugus	44.47	2.00e-126	443.00
IUUC-Nfi-068484	Neosartorya fischeri	54.94	8.00e-156	541.00
IUUC-Ncr-068649	Neurospora crassa	47.90	1.00e-130	457.00
IUUC-Nle-069140	Nomascus leucogenys	44.03	6.00e-126	441.00
IUUC-Opr-070220	Ochotona princeps	42.16	8.00e-111	391.00
IUUC-Ont-072643	Oreochromis niloticus	47.35	1.00e-131	460.00
IUUC-Ocu-074007	Oryctolagus cuniculus	44.35	1.00e-124	437.00
IUUC-Oba-075904	Oryza barthii	48.00	1.00e-132	464.00
IUUC-Obr-076280	Oryza brachyantha	47.37	1.00e-131	460.00
IUUC-Ogl-077425	Oryza glaberrima	48.21	6.00e-133	465.00
IUUC-Ogu-078586	Oryza glumaepatula	48.00	3.00e-132	462.00
IUUC-Oin-079489	Oryza indica	46.40	6.00e-125	438.00
IUUC-Olo-080766	Oryza longistaminata	48.00	2.00e-132	463.00
IUUC-Ome-081905	Oryza meridionalis	48.00	1.00e-132	464.00
IUUC-Oni-083022	Oryza nivara	48.09	2.00e-132	463.00
IUUC-Opu-083615	Oryza punctata	48.00	1.00e-132	464.00
IUUC-Oru-085076	Oryza rufipogon	48.09	2.00e-132	463.00
IUUC-Osa-085516	Oryza sativa	48.09	2.00e-132	463.00
IUUC-Ola-087290	Oryzias latipes	46.26	2.00e-131	459.00
IUUC-Olu-087898	Ostreococcus lucimarinus	48.19	3.00e-124	436.00
IUUC-Oga-088980	Otolemur garnettii	44.08	3.00e-125	439.00
IUUC-Oar-089580	Ovis aries	40.89	1.00e-100	357.00
IUUC-Ptr-090845	Pan troglodytes	44.24	4.00e-125	439.00
IUUC-Pan-092836	Papio anubis	44.29	3.00e-127	446.00
IUUC-Psi-093232	Pelodiscus sinensis	29.45	8.00e-34	135.00
IUUC-Pno-095052	Phaeosphaeria nodorum	51.63	6.00e-147	511.00
IUUC-Ppa-095432	Physcomitrella patens	48.09	5.00e-132	462.00
IUUC-Pfo-096963	Poecilia formosa	41.39	1.00e-106	377.00
IUUC-Pab-097716	Pongo abelii	42.18	4.00e-117	412.00
IUUC-Pop-099224	Populus trichocarpa	46.58	1.00e-131	461.00
IUUC-Pca-100682	Procavia capensis	51.80	2.00e-107	380.00
IUUC-Ppe-101819	Prunus persica	48.10	7.00e-131	458.00
IUUC-Pva-102338	Pteropus vampyrus	36.29	6.00e-76	275.00
IUUC-Pgr-103583	Puccinia graminis	49.15	7.00e-121	425.00
IUUC-Ptt-103737	Puccinia triticina	37.92	3.00e-97	347.00
IUUC-Pte-104150	Pyrenophora teres	51.54	1.00e-144	503.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	50.77	3.00e-144	502.00
IUUC-Rno-105987	Rattus norvegicus	45.06	1.00e-125	440.00
IUUC-Sce-106315	Saccharomyces cerevisiae	69.73	0.00e+00	744.00
IUUC-Sha-107273	Sarcophilus harrisii	45.75	2.00e-129	453.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	55.34	5.00e-164	568.00
IUUC-Spo-108092	Schizosaccharomyces pombe	54.17	1.00e-159	553.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	49.03	5.00e-136	475.00
IUUC-Smo-108855	Selaginella moellendorffii	46.58	4.00e-127	446.00
IUUC-Sit-110329	Setaria italica	47.17	3.00e-131	460.00
IUUC-Sly-111830	Solanum lycopersicum	48.25	8.00e-133	464.00
IUUC-Stu-112603	Solanum tuberosum	48.04	5.00e-132	462.00
IUUC-Sbi-114560	Sorghum bicolor	46.54	1.00e-130	457.00
IUUC-Sre-115133	Sporisorium reilianum	40.44	7.00e-121	425.00
IUUC-Ssc-115903	Sus scrofa	45.01	2.00e-129	453.00
IUUC-Tgu-116798	Taeniopygia guttata	45.79	3.00e-128	449.00
IUUC-Tru-118361	Takifugu rubripes	45.29	2.00e-130	456.00
IUUC-Tsy-118849	Tarsius syrichta	43.37	3.00e-126	442.00
IUUC-Tni-120094	Tetraodon nigroviridis	45.71	4.00e-128	449.00
IUUC-Tca-121634	Theobroma cacao	47.58	5.00e-130	455.00
IUUC-Tre-122051	Trichoderma reesei	50.09	7.00e-132	461.00
IUUC-Tvi-122322	Trichoderma virens	50.85	5.00e-137	478.00
IUUC-Tae-123133	Triticum aestivum	46.75	7.00e-131	458.00
IUUC-Tur-126766	Triticum urartu	41.76	6.00e-123	432.00
IUUC-Tme-127175	Tuber melanosporum	57.17	1.00e-172	597.00
IUUC-Tbe-127779	Tupaia belangeri	45.60	2.00e-118	417.00
IUUC-Ttr-128224	Tursiops truncatus	46.17	1.00e-118	417.00
IUUC-Uma-129537	Ustilago maydis	40.72	3.00e-121	426.00
IUUC-Vda-129927	Verticillium dahliae	48.37	2.00e-132	463.00
IUUC-Vpa-130658	Vicugna pacos	65.52	7.00e-56	209.00
IUUC-Vvi-131659	Vitis vinifera	45.16	3.00e-129	452.00
IUUC-Xtr-132918	Xenopus tropicalis	45.31	6.00e-122	428.00
IUUC-Xma-133700	Xiphophorus maculatus	46.12	1.00e-129	454.00
IUUC-Yli-134478	Yarrowia lipolytica	66.22	0.00e+00	721.00
IUUC-Zma-135835	Zea mays	44.33	5.00e-126	442.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence