iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPFOG00000012927.2	ENSPFOT00000013005.2	ENSPFOP00000012987.2
ENSPFOG00000012927.2	ENSPFOT00000031067.1	ENSPFOP00000021783.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/GAT	2.20e-19	70.3	224	311
UBD/Alpha-Helix/VHS	1.70e-44	151.6	27	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/GAT

   S: 39   ekikkliseleevksnvkllnemlselspegeepednellqelyetckaarpkllklieeeedndellaellkanDelnqvlnkykqlk 127
           ++ +kl+sel  vk+n  ++++ml el+p+++ + d ellq+l++ ck+++ ++++li +   ++ +++ell++nD+ln+ + ++++++
   Q: 224  QQERKLRSELALVKGNLAVMSQMLNELKPGQSTADDAELLQQLFSVCKKMQSRVVELIPQ-LVDEGFMEELLMVNDDLNNTFIRFERFE 311
           677899******************************************************.88999********************997 PP

UBD/Alpha-Helix/VHS

   S: 1    atselvtsedwelileicdliqetkegakdalralrkri.nnknphvalraLtlLdscvsnCgkkfhvevaskdllee..lrell.kne 85
           ats +++sedw l++eicd+i+et+eg++da++a++kri +nkn+ + ++aLt+L++cv+nCg++fhv+vas++++e   +r++l k +
   Q: 27   ATSGSLQSEDWGLNMEICDIINETDEGPRDAVKAIKKRIvGNKNFREIMLALTVLETCVKNCGHRFHVLVASQEFVEGvlVRSILpKYN 115
           68999*********************************99*************************************9889******** PP
   S: 86   nepkvieKlkalivsWadelknepalslivaliktlkeeGlefp 129
           +++ +++++++li+sWad+++++p+l ++v+++ +l+++Glefp
   Q: 116  PPTALHDRVLSLIQSWADAFRSSPSLVGVVHVYDDLRRRGLEFP 159
           *******************************************8 PP

Organism

Poecilia formosa

Protein Sequence
(Fasta)

MFSLGETMEF LLGNPFSTPV GQRIDQATSG SLQSEDWGLN MEICDIINET DEGPRDAVKA 60
IKKRIVGNKN FREIMLALTV LETCVKNCGH RFHVLVASQE FVEGVLVRSI LPKYNPPTAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGACTGTAA ACTGATAATG TGATCAGAGG TGTGCGTGTG TGTGTGCGCG CGCTTCCGTG 60
TGAGTTTTCA CGTGACCTCC CACAGAGCTA GTGCACCTCT GCAAGCAGTG GCTGCTTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport

Interpro

IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR014645--TOM1
IPR002014--VHS_dom

PROSITE

PS50909--GAT
PS50179--VHS

Pfam

PF03127--GAT
PF00790--VHS

SMART

SM00288--VHS

Gene Ontology

GO:0005622--C:intracellular
GO:0006886--P:intracellular protein transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010695	Astyanax mexicanus	60.31	3.00e-168	585.00
IUUC-Gac-042542	Gasterosteus aculeatus	70.30	0.00e+00	679.00
IUUC-Ont-072061	Oreochromis niloticus	71.40	0.00e+00	675.00
IUUC-Ola-087364	Oryzias latipes	67.82	0.00e+00	647.00
IUUC-Olu-087840	Ostreococcus lucimarinus	34.01	5.00e-16	79.30
IUUC-Pca-100907	Procavia capensis	53.22	3.00e-126	445.00
IUUC-Pgr-103677	Puccinia graminis	26.49	6.00e-21	95.90
IUUC-Smo-109609	Selaginella moellendorffii	35.71	3.00e-20	92.80
IUUC-Sre-115232	Sporisorium reilianum	24.62	4.00e-18	86.30
IUUC-Tru-117863	Takifugu rubripes	68.06	0.00e+00	656.00
IUUC-Tni-120701	Tetraodon nigroviridis	71.40	0.00e+00	694.00
IUUC-Uma-129380	Ustilago maydis	25.95	3.00e-15	76.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence