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Tag Content
iUUCD ID IUUC-Pop-098819
Ensembl Protein ID POPTR_0001s16980.1
UniProt Accession B9GKV2; B9GKV2_POPTR
Genbank Protein ID EEE84398.2
Protein Name Ubiquitin-like protein ATG12
Genbank Nucleotide ID CM000337
Gene Name POPTR_0001s16980g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s16980 POPTR_0001s16980.1 POPTR_0001s16980.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
ULD/UBL/ATG12 39.58 8.00e-16 79.30 IUUC-Hsa-046903
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Populus trichocarpa
Functional Description
(View)

Functional Description


     Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
 Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
Protein Sequence
(Fasta)
MEIESQDSAR KVIIQLKATA DAPILKQKKF KMLGTDKFAK VIDFLRRQIH RETVFVYINS 60
AFSPNPDELV IDLFNNFGVD GKLLVNYACS VAWG 94
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Protein Fasta Sequence


>IUUC-Pop-098819|ULD,ATG12|Populus trichocarpa
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Nucleotide Sequence
(Fasta)
AGCAAAACCT TTCGTGGACG TATCAAAATC CCTGACTTGT ATGTTTCAAC TCTTGTAGCT 60
TTCAAATTCT AAGCTCATAG CAACATGGAG ATTGAATCAC AGGATTCTGC TCGAAAAGGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-098819|ULD,ATG12|Populus trichocarpa
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Sequence Source Ensembl
Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
Interpro

IPR007242--Atg12
IPR029071--Ubiquitin-rel_dom
Pfam

PF04110--APG12
Gene Ontology

GO:0034274--C:Atg12-Atg5-Atg16 complex
GO:0034045--C:pre-autophagosomal structure membrane
GO:0019776--F:Atg8 ligase activity
GO:0000045--P:autophagosome assembly
GO:0006501--P:C-terminal protein lipidation
GO:0000422--P:mitophagy
GO:0044804--P:nucleophagy
KEGG pop:POPTR_0001s16980g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001177 Aegilops tauschii 58.70 2.00e-33 132.00
IUUC-Aml-002116 Ailuropoda melanoleuca 38.54 1.00e-16 78.60
IUUC-Atr-002615 Amborella trichopoda 75.53 3.00e-41 158.00
IUUC-Apl-003753 Anas platyrhynchos 47.50 2.00e-08 49.70
IUUC-Aca-005231 Anolis carolinensis 36.46 4.00e-13 66.60
IUUC-Aly-006172 Arabidopsis lyrata 72.34 6.00e-39 150.00
IUUC-Ath-006953 Arabidopsis thaliana 69.15 1.00e-38 150.00
IUUC-Ago-007970 Ashbya gossypii 37.21 5.00e-05 40.40
IUUC-Acl-008072 Aspergillus clavatus 37.50 2.00e-13 67.40
IUUC-Afl-008725 Aspergillus flavus 41.38 4.00e-14 70.50
IUUC-Afu-008967 Aspergillus fumigatus 37.93 1.00e-12 65.50
IUUC-Ani-009248 Aspergillus nidulans 37.93 1.00e-12 65.50
IUUC-Ang-009684 Aspergillus niger 37.21 5.00e-12 63.20
IUUC-Aor-009947 Aspergillus oryzae 41.38 4.00e-14 70.50
IUUC-Ame-011656 Astyanax mexicanus 37.36 6.00e-14 68.90
IUUC-Bgr-012174 Blumeria graminis 35.96 7.00e-10 55.80
IUUC-Bta-012483 Bos taurus 40.66 6.00e-17 79.00
IUUC-Bci-013755 Botrytis cinerea 33.33 2.00e-09 53.90
IUUC-Bdi-014156 Brachypodium distachyon 69.41 1.00e-34 136.00
IUUC-Bol-015683 Brassica oleracea 70.97 4.00e-37 145.00
IUUC-Bra-016802 Brassica rapa 73.56 6.00e-38 147.00
IUUC-Cel-018242 Caenorhabditis elegans 34.07 4.00e-08 49.30
IUUC-Cja-019514 Callithrix jacchus 39.58 1.00e-16 79.00
IUUC-Cfa-020748 Canis familiaris 38.54 1.00e-16 78.60
IUUC-Cpo-021965 Cavia porcellus 38.54 1.00e-16 78.60
IUUC-Cre-023009 Chlamydomonas reinhardtii 41.67 2.00e-16 76.30
IUUC-Csa-023494 Chlorocebus sabaeus 39.58 5.00e-17 79.30
IUUC-Cho-024631 Choloepus hoffmanni 40.66 1.00e-16 78.60
IUUC-Cin-025609 Ciona intestinalis 39.56 3.00e-15 72.40
IUUC-Cgl-026722 Colletotrichum gloeosporioides 34.07 7.00e-11 59.30
IUUC-Dre-027479 Danio rerio 39.36 1.00e-15 74.30
IUUC-Dno-029693 Dasypus novemcinctus 36.26 6.00e-12 62.40
IUUC-Dse-031440 Dothistroma septosporum 37.93 3.00e-13 67.00
IUUC-Dme-031892 Drosophila melanogaster 31.18 2.00e-11 59.70
IUUC-Ete-032550 Echinops telfairi 41.67 2.00e-15 73.60
IUUC-Eca-033553 Equus caballus 39.58 5.00e-17 79.30
IUUC-Fca-036524 Felis catus 38.95 8.00e-17 79.00
IUUC-Fal-036942 Ficedula albicollis 37.21 1.00e-14 70.50
IUUC-Fox-037753 Fusarium oxysporum 36.67 6.00e-12 62.80
IUUC-Gmo-039498 Gadus morhua 39.56 5.00e-15 72.40
IUUC-Ggr-039852 Gaeumannomyces graminis 37.08 5.00e-10 57.00
IUUC-Gga-041263 Gallus gallus 37.50 4.00e-16 76.30
IUUC-Gac-042346 Gasterosteus aculeatus 41.46 1.00e-13 67.80
IUUC-Gma-042896 Glycine max 78.72 1.00e-42 163.00
IUUC-Ggo-045601 Gorilla gorilla 39.58 9.00e-17 79.30
IUUC-Hsa-046903 Homo sapiens 39.58 5.00e-17 79.30
IUUC-Hvu-047239 Hordeum vulgare 60.87 6.00e-34 134.00
IUUC-Itr-048445 Ictidomys tridecemlineatus 40.62 3.00e-17 80.50
IUUC-Kpa-049355 Komagataella pastoris 31.25 3.00e-10 56.60
IUUC-Lch-050619 Latimeria chalumnae 37.50 1.00e-14 71.60
IUUC-Loc-052102 Lepisosteus oculatus 45.83 8.00e-03 30.80
IUUC-Lma-053299 Leptosphaeria maculans 31.94 5.00e-07 45.80
IUUC-Laf-054205 Loxodonta africana 39.58 4.00e-17 79.70
IUUC-Meu-056804 Macropus eugenii 39.56 1.00e-16 78.20
IUUC-Mor-057052 Magnaporthe oryzae 35.56 8.00e-10 55.80
IUUC-Mtr-057961 Medicago truncatula 79.12 3.00e-42 162.00
IUUC-Mla-059045 Melampsora laricipopulina 47.13 1.00e-21 94.00
IUUC-Mvi-060360 Microbotryum violaceum 47.13 6.00e-21 92.00
IUUC-Mmr-061654 Microcebus murinus 40.66 4.00e-17 79.30
IUUC-Mdo-062649 Monodelphis domestica 40.66 7.00e-17 79.00
IUUC-Mmu-064105 Mus musculus 40.66 6.00e-17 79.00
IUUC-Mac-065532 Musa acuminata 73.40 6.00e-40 154.00
IUUC-Mpu-066269 Mustela putorius furo 38.54 7.00e-17 79.00
IUUC-Mlu-067631 Myotis lucifugus 39.18 8.00e-17 79.00
IUUC-Nfi-068468 Neosartorya fischeri 36.46 4.00e-13 65.90
IUUC-Ncr-068750 Neurospora crassa 34.09 2.00e-10 57.80
IUUC-Nle-069483 Nomascus leucogenys 39.58 1.00e-16 79.00
IUUC-Opr-070936 Ochotona princeps 39.58 2.00e-16 77.80
IUUC-Obr-076322 Oryza brachyantha 67.06 1.00e-34 136.00
IUUC-Ogl-077226 Oryza glaberrima 68.75 1.00e-32 130.00
IUUC-Oin-079220 Oryza indica 75.41 2.00e-26 109.00
IUUC-Olo-080688 Oryza longistaminata 68.75 1.00e-32 130.00
IUUC-Ome-081265 Oryza meridionalis 68.75 1.00e-32 130.00
IUUC-Oru-084342 Oryza rufipogon 67.06 3.00e-34 137.00
IUUC-Osa-086212 Oryza sativa 68.75 1.00e-32 130.00
IUUC-Ola-087277 Oryzias latipes 37.63 1.00e-14 70.50
IUUC-Olu-087780 Ostreococcus lucimarinus 38.04 7.00e-15 71.20
IUUC-Oga-088175 Otolemur garnettii 40.66 5.00e-17 79.30
IUUC-Oar-089477 Ovis aries 40.66 1.00e-16 78.60
IUUC-Ptr-091129 Pan troglodytes 39.58 9.00e-17 79.30
IUUC-Psi-093351 Pelodiscus sinensis 38.54 4.00e-17 80.10
IUUC-Pno-094948 Phaeosphaeria nodorum 32.89 1.00e-07 47.80
IUUC-Ppa-095788 Physcomitrella patens 69.89 2.00e-37 145.00
IUUC-Pfo-096993 Poecilia formosa 34.41 8.00e-13 65.10
IUUC-Pab-098502 Pongo abelii 39.58 8.00e-17 79.30
IUUC-Pca-100144 Procavia capensis 30.21 1.00e-06 45.40
IUUC-Ppe-101560 Prunus persica 80.49 6.00e-39 150.00
IUUC-Pva-102810 Pteropus vampyrus 35.06 4.00e-09 53.50
IUUC-Pgr-103531 Puccinia graminis 48.91 9.00e-23 97.80
IUUC-Ptt-103753 Puccinia triticina 47.83 4.00e-22 95.50
IUUC-Pyt-104733 Pyrenophora triticirepentis 40.70 5.00e-13 66.20
IUUC-Rno-106072 Rattus norvegicus 42.86 1.00e-17 81.30
IUUC-Sce-106275 Saccharomyces cerevisiae 32.94 5.00e-10 56.60
IUUC-Sha-107554 Sarcophilus harrisii 38.54 1.00e-16 78.20
IUUC-Sja-107682 Schizosaccharomyces japonicus 34.48 3.00e-12 63.20
IUUC-Spo-108275 Schizosaccharomyces pombe 36.36 4.00e-16 76.30
IUUC-Smo-109151 Selaginella moellendorffii 54.65 2.00e-23 99.80
IUUC-Sit-110270 Setaria italica 72.94 3.00e-36 142.00
IUUC-Sly-111862 Solanum lycopersicum 81.40 1.00e-40 156.00
IUUC-Stu-112663 Solanum tuberosum 81.82 4.00e-19 85.50
IUUC-Sbi-114148 Sorghum bicolor 72.94 3.00e-36 142.00
IUUC-Sre-115216 Sporisorium reilianum 39.58 5.00e-19 85.90
IUUC-Ssc-116051 Sus scrofa 39.58 5.00e-17 79.30
IUUC-Tgu-117008 Taeniopygia guttata 29.27 3.70e-02 29.30
IUUC-Tru-118466 Takifugu rubripes 41.46 7.00e-14 67.80
IUUC-Tsy-119334 Tarsius syrichta 39.58 4.00e-13 67.00
IUUC-Tni-119792 Tetraodon nigroviridis 41.46 3.00e-14 68.90
IUUC-Tca-121861 Theobroma cacao 77.66 2.00e-42 162.00
IUUC-Tvi-122499 Trichoderma virens 37.50 5.00e-12 62.40
IUUC-Tae-123431 Triticum aestivum 58.70 2.00e-33 132.00
IUUC-Tme-126934 Tuber melanosporum 35.87 2.00e-11 61.20
IUUC-Ttr-129001 Tursiops truncatus 35.79 3.00e-12 63.90
IUUC-Uma-129324 Ustilago maydis 38.54 1.00e-18 84.70
IUUC-Vda-129846 Verticillium dahliae 32.95 4.00e-10 56.60
IUUC-Vpa-130202 Vicugna pacos 50.00 4.00e-09 53.90
IUUC-Vvi-131474 Vitis vinifera 76.62 4.00e-32 129.00
IUUC-Xtr-132782 Xenopus tropicalis 38.46 3.00e-16 77.00
IUUC-Xma-134140 Xiphophorus maculatus 35.48 2.00e-13 67.40
IUUC-Yli-134517 Yarrowia lipolytica 36.36 9.00e-10 56.20
IUUC-Zma-134764 Zea mays 68.89 2.00e-36 142.00
Created Date 25-Jun-2017

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