iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017642

Ensembl Protein ID

Bra022611.1-P

UniProt Accession

M4E1G3; M4E1G3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022611	Bra022611.1	Bra022611.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-62	203.5	110	146
UBD/Beta-Prp	2.90e-74	251.0	104	301

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH++ v c++f +d + l+sGs+D t+++WDl t ++
   Q: 110  GHAEAVLCVSFsPDgKQLASGSGDTTVRLWDLYTETP 146
           8***********999****************988766 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgv 139
           + +++ gh ++v +v+fspdgk l++gs D t+++wdl t +++ t kgh + vls+++sp+g++lvsGs+   i +w+ ++g+   ++l+gh+++
   Q: 104  CSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHRNWVLSIAWSPDGKHLVSGSKSGEICCWNPKKGELDGNPLTGHKKW 199
           47889*************************************************************************9999999999******** PP
   S: 140  vncvvvhpd.....gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrf 230
           ++++++ p      ++ +v++s+D+  r+Wd+  +k l  l+g ht +v+++++  +g  + +gs+d t+k+w+  +g+ +r+l+gh  +v+s+++
   Q: 200  ITGISWEPVhlsspCRRFVTSSKDGDARIWDVTLKKTLICLSG-HTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWVNSLAL 293
           ****9987522222479************************99.************98.9************************************ PP
   S: 231  spnderlvsg 240
           s  +e+++ +
   Q: 294  S--TEYVLRT 301
           9..5555443 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNMETSQAGM GNNTVMCLLT DPEGTNLGSA MYIPQTAGPL QLTQLVNRFL NNEEMLPYSF 60
YVSDEELLVP VGTYLENNNV SVETVLTIVY QQQAVFRIRP VNRCSQTIAG HAEAVLCVSF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACATGG AGACGAGCCA AGCAGGGATG GGGAACAACA CGGTGATGTG TCTGTTAACA 60
GACCCAGAAG GAACGAACTT AGGTTCCGCC ATGTATATTC CTCAGACCGC TGGTCCTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000437	Aegilops tauschii	74.35	0.00e+00	742.00
IUUC-Aml-001793	Ailuropoda melanoleuca	55.56	4.00e-161	560.00
IUUC-Atr-002507	Amborella trichopoda	76.46	0.00e+00	761.00
IUUC-Apl-003964	Anas platyrhynchos	56.44	5.00e-155	540.00
IUUC-Aly-006396	Arabidopsis lyrata	92.44	0.00e+00	925.00
IUUC-Ath-007278	Arabidopsis thaliana	92.65	0.00e+00	924.00
IUUC-Ago-007951	Ashbya gossypii	46.14	8.00e-127	446.00
IUUC-Acl-008298	Aspergillus clavatus	48.19	5.00e-118	417.00
IUUC-Afl-008581	Aspergillus flavus	55.65	3.00e-113	400.00
IUUC-Afu-008906	Aspergillus fumigatus	46.58	7.00e-115	407.00
IUUC-Ani-009189	Aspergillus nidulans	46.82	4.00e-117	414.00
IUUC-Ang-009630	Aspergillus niger	50.44	1.00e-125	443.00
IUUC-Aor-010038	Aspergillus oryzae	49.47	5.00e-129	454.00
IUUC-Ate-010278	Aspergillus terreus	51.14	3.00e-120	425.00
IUUC-Ame-011890	Astyanax mexicanus	55.84	6.00e-156	543.00
IUUC-Bgr-012011	Blumeria graminis	50.62	6.00e-122	430.00
IUUC-Bta-012964	Bos taurus	55.34	2.00e-160	558.00
IUUC-Bci-013592	Botrytis cinerea	46.05	3.00e-116	411.00
IUUC-Bdi-015035	Brachypodium distachyon	73.49	0.00e+00	745.00
IUUC-Bol-015501	Brassica oleracea	98.95	0.00e+00	978.00
IUUC-Cel-018430	Caenorhabditis elegans	53.02	8.00e-145	506.00
IUUC-Cja-019125	Callithrix jacchus	55.98	8.00e-162	563.00
IUUC-Cfa-021013	Canis familiaris	55.58	2.00e-155	541.00
IUUC-Cpo-021743	Cavia porcellus	55.34	5.00e-161	560.00
IUUC-Cre-022973	Chlamydomonas reinhardtii	49.36	7.00e-134	469.00
IUUC-Csa-024270	Chlorocebus sabaeus	55.56	3.00e-160	557.00
IUUC-Cin-025795	Ciona intestinalis	54.16	3.00e-156	544.00
IUUC-Csv-025953	Ciona savignyi	54.37	4.00e-155	540.00
IUUC-Cgl-026517	Colletotrichum gloeosporioides	50.67	5.00e-104	370.00
IUUC-Cne-026901	Cryptococcus neoformans	46.17	1.00e-126	446.00
IUUC-Cme-027281	Cyanidioschyzon merolae	46.88	5.00e-114	404.00
IUUC-Dre-028515	Danio rerio	57.48	2.00e-158	551.00
IUUC-Dno-029596	Dasypus novemcinctus	55.77	3.00e-161	561.00
IUUC-Dor-030494	Dipodomys ordii	55.46	6.00e-159	553.00
IUUC-Dse-031538	Dothistroma septosporum	50.33	6.00e-128	450.00
IUUC-Dme-031974	Drosophila melanogaster	53.21	1.00e-146	512.00
IUUC-Ete-032948	Echinops telfairi	59.13	8.00e-74	270.00
IUUC-Eca-033399	Equus caballus	55.34	3.00e-160	558.00
IUUC-Eeu-035013	Erinaceus europaeus	60.10	4.00e-74	271.00
IUUC-Fca-035860	Felis catus	55.13	2.00e-160	558.00
IUUC-Fal-037069	Ficedula albicollis	60.91	2.00e-90	324.00
IUUC-Fox-038059	Fusarium oxysporum	48.64	4.00e-121	427.00
IUUC-Fso-038445	Fusarium solani	48.06	7.00e-120	423.00
IUUC-Gmo-039319	Gadus morhua	56.33	8.00e-147	513.00
IUUC-Ggr-040095	Gaeumannomyces graminis	44.49	2.00e-120	425.00
IUUC-Gga-040303	Gallus gallus	60.91	3.00e-89	320.00
IUUC-Gac-042267	Gasterosteus aculeatus	55.34	7.00e-149	520.00
IUUC-Gma-044360	Glycine max	80.00	0.00e+00	801.00
IUUC-Ggo-044637	Gorilla gorilla	55.34	2.00e-159	555.00
IUUC-Hsa-046128	Homo sapiens	55.56	2.00e-161	561.00
IUUC-Hvu-047373	Hordeum vulgare	72.30	0.00e+00	741.00
IUUC-Itr-048070	Ictidomys tridecemlineatus	55.18	3.00e-160	557.00
IUUC-Kpa-049274	Komagataella pastoris	44.24	1.00e-123	436.00
IUUC-Lch-049907	Latimeria chalumnae	53.08	2.00e-147	515.00
IUUC-Lpe-050778	Leersia perrieri	67.16	0.00e+00	677.00
IUUC-Loc-051889	Lepisosteus oculatus	56.26	6.00e-159	553.00
IUUC-Lma-053041	Leptosphaeria maculans	48.83	2.00e-118	419.00
IUUC-Laf-053598	Loxodonta africana	54.15	5.00e-162	563.00
IUUC-Mcc-055660	Macaca mulatta	55.77	3.00e-160	558.00
IUUC-Meu-056197	Macropus eugenii	50.54	2.00e-136	478.00
IUUC-Mor-056949	Magnaporthe oryzae	45.15	8.00e-117	413.00
IUUC-Mpo-057571	Magnaporthe poae	51.85	9.00e-63	234.00
IUUC-Mtr-058530	Medicago truncatula	78.71	0.00e+00	759.00
IUUC-Mla-059133	Melampsora laricipopulina	51.87	5.00e-120	424.00
IUUC-Mga-059252	Meleagris gallopavo	60.16	3.00e-132	464.00
IUUC-Mvi-060522	Microbotryum violaceum	44.63	2.00e-124	438.00
IUUC-Mmr-061117	Microcebus murinus	55.32	2.00e-158	551.00
IUUC-Mdo-062892	Monodelphis domestica	54.96	6.00e-161	560.00
IUUC-Mmu-064108	Mus musculus	55.34	1.00e-156	545.00
IUUC-Mac-064430	Musa acuminata	77.59	0.00e+00	792.00
IUUC-Mpu-065882	Mustela putorius furo	55.13	7.00e-160	556.00
IUUC-Mlu-068123	Myotis lucifugus	55.34	1.00e-160	559.00
IUUC-Nfi-068484	Neosartorya fischeri	47.01	6.00e-116	410.00
IUUC-Ncr-068649	Neurospora crassa	45.15	3.00e-111	395.00
IUUC-Nle-069140	Nomascus leucogenys	55.34	1.00e-160	559.00
IUUC-Opr-070220	Ochotona princeps	51.46	1.00e-137	483.00
IUUC-Ont-072643	Oreochromis niloticus	55.86	8.00e-156	543.00
IUUC-Ocu-074007	Oryctolagus cuniculus	55.98	3.00e-158	551.00
IUUC-Oba-075904	Oryza barthii	73.97	0.00e+00	747.00
IUUC-Obr-076618	Oryza brachyantha	72.92	0.00e+00	750.00
IUUC-Ogl-077425	Oryza glaberrima	73.75	0.00e+00	746.00
IUUC-Ogu-078586	Oryza glumaepatula	73.33	0.00e+00	748.00
IUUC-Oin-079489	Oryza indica	71.80	0.00e+00	717.00
IUUC-Olo-080766	Oryza longistaminata	73.70	0.00e+00	745.00
IUUC-Ome-081905	Oryza meridionalis	74.19	0.00e+00	748.00
IUUC-Oni-083022	Oryza nivara	73.97	0.00e+00	748.00
IUUC-Opu-083615	Oryza punctata	74.19	0.00e+00	748.00
IUUC-Oru-085076	Oryza rufipogon	73.97	0.00e+00	748.00
IUUC-Osa-085744	Oryza sativa	74.40	0.00e+00	750.00
IUUC-Ola-087290	Oryzias latipes	55.44	5.00e-156	543.00
IUUC-Olu-087898	Ostreococcus lucimarinus	59.76	3.00e-158	551.00
IUUC-Oga-088980	Otolemur garnettii	55.13	1.00e-159	555.00
IUUC-Oar-089580	Ovis aries	53.58	4.00e-131	460.00
IUUC-Ptr-090845	Pan troglodytes	54.49	4.00e-158	550.00
IUUC-Pan-092836	Papio anubis	55.77	7.00e-161	560.00
IUUC-Pno-095052	Phaeosphaeria nodorum	47.44	1.00e-120	426.00
IUUC-Ppa-095432	Physcomitrella patens	71.25	0.00e+00	728.00
IUUC-Pfo-096963	Poecilia formosa	50.53	5.00e-132	463.00
IUUC-Pab-097716	Pongo abelii	52.35	6.00e-149	520.00
IUUC-Pop-099224	Populus trichocarpa	80.43	0.00e+00	807.00
IUUC-Pca-100682	Procavia capensis	58.31	1.00e-126	445.00
IUUC-Ppe-101819	Prunus persica	79.87	0.00e+00	805.00
IUUC-Pva-102338	Pteropus vampyrus	52.12	2.00e-108	385.00
IUUC-Pgr-103583	Puccinia graminis	52.35	1.00e-124	439.00
IUUC-Ptt-103737	Puccinia triticina	41.25	8.00e-90	324.00
IUUC-Pte-104150	Pyrenophora teres	47.94	4.00e-119	421.00
IUUC-Pyt-104606	Pyrenophora triticirepentis	48.17	1.00e-119	423.00
IUUC-Rno-105987	Rattus norvegicus	55.56	4.00e-161	560.00
IUUC-Sce-106315	Saccharomyces cerevisiae	48.94	4.00e-132	464.00
IUUC-Sha-107273	Sarcophilus harrisii	56.20	2.00e-165	574.00
IUUC-Sja-107677	Schizosaccharomyces japonicus	46.02	4.00e-118	417.00
IUUC-Spo-108092	Schizosaccharomyces pombe	47.47	1.00e-119	423.00
IUUC-Ssl-108442	Sclerotinia sclerotiorum	45.58	9.00e-115	407.00
IUUC-Smo-108855	Selaginella moellendorffii	65.62	0.00e+00	674.00
IUUC-Sit-110329	Setaria italica	73.76	0.00e+00	753.00
IUUC-Sly-111830	Solanum lycopersicum	80.22	0.00e+00	803.00
IUUC-Stu-112603	Solanum tuberosum	80.22	0.00e+00	802.00
IUUC-Sar-113504	Sorex araneus	48.18	1.00e-34	140.00
IUUC-Sbi-114560	Sorghum bicolor	74.03	0.00e+00	738.00
IUUC-Sre-115133	Sporisorium reilianum	39.40	1.00e-119	423.00
IUUC-Ssc-115903	Sus scrofa	55.34	3.00e-159	554.00
IUUC-Tgu-116798	Taeniopygia guttata	55.34	5.00e-159	553.00
IUUC-Tru-118361	Takifugu rubripes	56.52	8.00e-157	546.00
IUUC-Tsy-118849	Tarsius syrichta	55.27	6.00e-159	553.00
IUUC-Tni-120094	Tetraodon nigroviridis	55.65	1.00e-157	549.00
IUUC-Tca-121634	Theobroma cacao	79.29	0.00e+00	806.00
IUUC-Tre-122051	Trichoderma reesei	47.30	8.00e-113	400.00
IUUC-Tvi-122322	Trichoderma virens	48.30	1.00e-117	416.00
IUUC-Tae-125822	Triticum aestivum	74.40	0.00e+00	743.00
IUUC-Tur-126766	Triticum urartu	64.78	0.00e+00	714.00
IUUC-Tme-127175	Tuber melanosporum	51.14	6.00e-133	467.00
IUUC-Tbe-127779	Tupaia belangeri	57.61	2.00e-150	525.00
IUUC-Ttr-128224	Tursiops truncatus	56.07	8.00e-149	519.00
IUUC-Uma-129537	Ustilago maydis	43.10	2.00e-120	426.00
IUUC-Vda-129927	Verticillium dahliae	45.05	1.00e-109	389.00
IUUC-Vpa-130658	Vicugna pacos	50.00	6.00e-80	291.00
IUUC-Vvi-131659	Vitis vinifera	78.41	0.00e+00	804.00
IUUC-Xtr-132918	Xenopus tropicalis	50.96	2.00e-144	505.00
IUUC-Xma-133700	Xiphophorus maculatus	56.08	3.00e-157	547.00
IUUC-Yli-134478	Yarrowia lipolytica	49.38	2.00e-135	475.00
IUUC-Zma-135835	Zea mays	70.26	0.00e+00	729.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence