iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016089

Ensembl Protein ID

Bo4g136870.1

UniProt Accession

A0A0D3BZI9; A0A0D3BZI9_BRAOL

Protein Name

E3 ubiquitin-protein ligase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g136870	Bo4g136870.1	Bo4g136870.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	63.82	3.00e-91	331.00	IUUC-Ath-007187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica oleracea

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

Protein Sequence
(Fasta)

MVGAWVPVSG EKDGASSILS QKRKRSSKSS PDKRLSPALL DLNVLDCPIC FEAFTIPIFQ 60
CENGHLACSS CCPKMSNKCP TCALPTGHIR CRAMESVVES VCVPCPNAKS GCTENLSYGK 120

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Nucleotide Sequence
(Fasta)

ATGGTGGGAG CCTGGGTGCC GGTTTCGGGC GAAAAAGATG GAGCGAGCAG CATTCTCTCA 60
CAGAAGAGAA AACGTTCTTC CAAATCTTCA CCTGATAAGA GACTCTCGCC GGCGCTGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005653	Arabidopsis lyrata	62.87	3.00e-96	344.00
IUUC-Ath-007187	Arabidopsis thaliana	61.11	2.00e-99	354.00
IUUC-Bdi-014026	Brachypodium distachyon	28.79	4.00e-27	114.00
IUUC-Bra-016844	Brassica rapa	59.74	2.00e-76	278.00
IUUC-Cgl-026455	Colletotrichum gloeosporioides	27.88	6.00e-06	45.40
IUUC-Hvu-047394	Hordeum vulgare	32.32	2.00e-27	115.00
IUUC-Mtr-058360	Medicago truncatula	34.73	8.00e-37	147.00
IUUC-Oan-072802	Ornithorhynchus anatinus	30.77	1.00e-05	44.70
IUUC-Opu-083398	Oryza punctata	32.92	5.00e-26	112.00
IUUC-Tae-124152	Triticum aestivum	42.54	6.00e-26	110.00
IUUC-Tur-126619	Triticum urartu	42.76	3.00e-27	115.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence