iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107760

Ensembl Protein ID

EEB09300

UniProt Accession

B6K6Z6; B6K6Z6_SCHJY

Genbank Protein ID

EEB09300.1

Protein Name

U5 snRNP complex subunit Spp42

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_04497

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_04497	EEB09300	EEB09300

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Jab_MPN	62.40	0.00e+00	2980.00	IUUC-Sce-106157
UBD/Jab_MPN	62.31	0.00e+00	2977.00	IUUC-Ots-000011

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MAFLPPGPPP PRPPGYEPPG APPPPPPPED TSEEKPSKFA KNASTDKVIQ ERVRKWRTMQ 60
KLKYGPKRKQ GYVQTEKAPL PPEHLRKIMK DRGDMSSKKY RSDKRSYLGA LKYLPHAILK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTATACTTC TGTACCGTAC TATTCCCGCT CAAATCCTCT TTCTACCTCA CCACCACAAC 60
TACTACCACC ACCGACTCTA TACTTTGCTT TCAGGTATTG CCACTCACCA CCACGCGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000555--JAMM/MPN+_dom
IPR012591--PRO8NT
IPR012592--PROCN
IPR012984--PROCT
IPR027652--PRP8
IPR021983--PRP8_domainIV
IPR019581--Prp8_U5-snRNA-bd
IPR019580--Prp8_U6-snRNA-bd
IPR012337--RNaseH-like_dom
IPR019582--RRM_spliceosomal_PrP8

Pfam

PF01398--JAB
PF08082--PRO8NT
PF08083--PROCN
PF08084--PROCT
PF12134--PRP8_domainIV
PF10598--RRM_4
PF10597--U5_2-snRNA_bdg
PF10596--U6-snRNA_bdg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0071014--C:post-mRNA release spliceosomal complex
GO:0000974--C:Prp19 complex
GO:0005682--C:U5 snRNP
GO:0030623--F:U5 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000393--P:spliceosomal conformational changes to generate catalytic conformation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001091	Aegilops tauschii	74.05	0.00e+00	3472.00
IUUC-Aml-002261	Ailuropoda melanoleuca	74.29	0.00e+00	3533.00
IUUC-Atr-002524	Amborella trichopoda	73.46	0.00e+00	3497.00
IUUC-Apl-004039	Anas platyrhynchos	75.00	0.00e+00	3457.00
IUUC-Aca-005394	Anolis carolinensis	76.29	0.00e+00	2969.00
IUUC-Aly-005909	Arabidopsis lyrata	72.58	0.00e+00	3467.00
IUUC-Ath-007237	Arabidopsis thaliana	73.31	0.00e+00	3489.00
IUUC-Ago-007815	Ashbya gossypii	63.03	0.00e+00	3056.00
IUUC-Acl-008111	Aspergillus clavatus	73.47	0.00e+00	3558.00
IUUC-Afl-008609	Aspergillus flavus	73.84	0.00e+00	2182.00
IUUC-Afu-009078	Aspergillus fumigatus	74.70	0.00e+00	2361.00
IUUC-Ani-009297	Aspergillus nidulans	73.77	0.00e+00	2322.00
IUUC-Ang-009749	Aspergillus niger	73.50	0.00e+00	3555.00
IUUC-Aor-010106	Aspergillus oryzae	73.63	0.00e+00	3560.00
IUUC-Ate-010566	Aspergillus terreus	73.47	0.00e+00	3556.00
IUUC-Ame-011416	Astyanax mexicanus	73.99	0.00e+00	3556.00
IUUC-Bgr-012078	Blumeria graminis	71.07	0.00e+00	2221.00
IUUC-Bta-013532	Bos taurus	74.29	0.00e+00	3533.00
IUUC-Bci-013914	Botrytis cinerea	73.54	0.00e+00	2320.00
IUUC-Bdi-014349	Brachypodium distachyon	73.57	0.00e+00	3494.00
IUUC-Bol-015707	Brassica oleracea	73.13	0.00e+00	3472.00
IUUC-Bra-017086	Brassica rapa	72.36	0.00e+00	3451.00
IUUC-Cel-018508	Caenorhabditis elegans	73.15	0.00e+00	3481.00
IUUC-Cja-019483	Callithrix jacchus	74.29	0.00e+00	3533.00
IUUC-Cfa-021018	Canis familiaris	74.29	0.00e+00	3533.00
IUUC-Cpo-022159	Cavia porcellus	74.29	0.00e+00	3533.00
IUUC-Cre-022998	Chlamydomonas reinhardtii	72.63	0.00e+00	3382.00
IUUC-Csa-023885	Chlorocebus sabaeus	74.29	0.00e+00	3533.00
IUUC-Cho-024639	Choloepus hoffmanni	78.81	0.00e+00	2210.00
IUUC-Cin-025356	Ciona intestinalis	57.92	8.00e-148	514.00
IUUC-Csv-025880	Ciona savignyi	72.39	0.00e+00	3445.00
IUUC-Cgl-026713	Colletotrichum gloeosporioides	71.22	0.00e+00	3432.00
IUUC-Cne-026874	Cryptococcus neoformans	72.84	0.00e+00	2137.00
IUUC-Cme-027252	Cyanidioschyzon merolae	33.83	0.00e+00	992.00
IUUC-Dre-027996	Danio rerio	74.03	0.00e+00	3555.00
IUUC-Dno-029708	Dasypus novemcinctus	76.55	0.00e+00	3373.00
IUUC-Dor-030119	Dipodomys ordii	72.07	0.00e+00	3195.00
IUUC-Dse-031333	Dothistroma septosporum	72.06	0.00e+00	3431.00
IUUC-Dme-031908	Drosophila melanogaster	74.59	0.00e+00	3510.00
IUUC-Ete-032766	Echinops telfairi	75.14	0.00e+00	2984.00
IUUC-Eca-034109	Equus caballus	74.29	0.00e+00	3533.00
IUUC-Eeu-035094	Erinaceus europaeus	78.42	0.00e+00	1901.00
IUUC-Fca-035567	Felis catus	77.89	0.00e+00	3065.00
IUUC-Fal-036613	Ficedula albicollis	74.38	0.00e+00	3535.00
IUUC-Fox-037855	Fusarium oxysporum	72.64	0.00e+00	3493.00
IUUC-Fso-038078	Fusarium solani	72.55	0.00e+00	3489.00
IUUC-Gmo-038986	Gadus morhua	72.52	0.00e+00	3500.00
IUUC-Ggr-039855	Gaeumannomyces graminis	71.48	0.00e+00	3445.00
IUUC-Gga-040719	Gallus gallus	74.38	0.00e+00	3534.00
IUUC-Gac-042502	Gasterosteus aculeatus	73.81	0.00e+00	3548.00
IUUC-Gma-043317	Glycine max	73.28	0.00e+00	3467.00
IUUC-Ggo-045622	Gorilla gorilla	70.67	0.00e+00	3286.00
IUUC-Hsa-046060	Homo sapiens	74.29	0.00e+00	3533.00
IUUC-Hvu-047251	Hordeum vulgare	75.86	0.00e+00	3338.00
IUUC-Itr-048517	Ictidomys tridecemlineatus	72.72	0.00e+00	1814.00
IUUC-Kpa-049289	Komagataella pastoris	66.49	0.00e+00	3181.00
IUUC-Lch-049690	Latimeria chalumnae	74.06	0.00e+00	3290.00
IUUC-Lpe-050868	Leersia perrieri	72.65	0.00e+00	3479.00
IUUC-Loc-052365	Lepisosteus oculatus	73.65	0.00e+00	3539.00
IUUC-Lma-053043	Leptosphaeria maculans	72.81	0.00e+00	3540.00
IUUC-Laf-053582	Loxodonta africana	74.29	0.00e+00	3533.00
IUUC-Mcc-055024	Macaca mulatta	74.29	0.00e+00	3533.00
IUUC-Meu-056637	Macropus eugenii	73.14	0.00e+00	3433.00
IUUC-Mor-057244	Magnaporthe oryzae	71.86	0.00e+00	3426.00
IUUC-Mpo-057580	Magnaporthe poae	71.21	0.00e+00	3440.00
IUUC-Mtr-058326	Medicago truncatula	73.32	0.00e+00	3491.00
IUUC-Mla-059121	Melampsora laricipopulina	72.20	0.00e+00	3372.00
IUUC-Mga-059789	Meleagris gallopavo	74.38	0.00e+00	3534.00
IUUC-Mvi-060563	Microbotryum violaceum	71.59	0.00e+00	3390.00
IUUC-Mmr-060880	Microcebus murinus	73.36	0.00e+00	3476.00
IUUC-Mdo-062237	Monodelphis domestica	74.29	0.00e+00	3531.00
IUUC-Mmu-064177	Mus musculus	74.29	0.00e+00	3534.00
IUUC-Mac-065558	Musa acuminata	72.28	0.00e+00	3340.00
IUUC-Mpu-066903	Mustela putorius furo	74.29	0.00e+00	3533.00
IUUC-Mlu-067424	Myotis lucifugus	74.19	0.00e+00	3524.00
IUUC-Nfi-068265	Neosartorya fischeri	74.38	0.00e+00	2350.00
IUUC-Ncr-068963	Neurospora crassa	72.41	0.00e+00	3476.00
IUUC-Nle-069111	Nomascus leucogenys	76.42	0.00e+00	2536.00
IUUC-Opr-070706	Ochotona princeps	73.39	0.00e+00	3465.00
IUUC-Ont-071405	Oreochromis niloticus	74.11	0.00e+00	3554.00
IUUC-Oan-073481	Ornithorhynchus anatinus	76.39	0.00e+00	1708.00
IUUC-Ocu-074231	Oryctolagus cuniculus	74.29	0.00e+00	3533.00
IUUC-Oba-075452	Oryza barthii	74.18	0.00e+00	3463.00
IUUC-Obr-076377	Oryza brachyantha	74.01	0.00e+00	3462.00
IUUC-Ogl-077666	Oryza glaberrima	73.81	0.00e+00	3495.00
IUUC-Ogu-078187	Oryza glumaepatula	74.22	0.00e+00	3467.00
IUUC-Oin-079234	Oryza indica	74.14	0.00e+00	3463.00
IUUC-Olo-080543	Oryza longistaminata	74.22	0.00e+00	3466.00
IUUC-Ome-081541	Oryza meridionalis	73.17	0.00e+00	3462.00
IUUC-Oni-082712	Oryza nivara	76.74	0.00e+00	2877.00
IUUC-Opu-083904	Oryza punctata	73.52	0.00e+00	3483.00
IUUC-Oru-084749	Oryza rufipogon	73.60	0.00e+00	3495.00
IUUC-Osa-085504	Oryza sativa	74.20	0.00e+00	1754.00
IUUC-Ola-087464	Oryzias latipes	74.41	0.00e+00	3377.00
IUUC-Olu-087705	Ostreococcus lucimarinus	72.47	0.00e+00	3449.00
IUUC-Oga-087910	Otolemur garnettii	93.02	9.00e-71	256.00
IUUC-Oar-089892	Ovis aries	74.19	0.00e+00	3528.00
IUUC-Ptr-090562	Pan troglodytes	85.59	0.00e+00	828.00
IUUC-Pan-092555	Papio anubis	74.86	0.00e+00	3506.00
IUUC-Psi-094049	Pelodiscus sinensis	74.25	0.00e+00	3533.00
IUUC-Pma-094240	Petromyzon marinus	73.02	0.00e+00	3340.00
IUUC-Pno-095146	Phaeosphaeria nodorum	70.94	0.00e+00	3427.00
IUUC-Ppa-095776	Physcomitrella patens	73.70	0.00e+00	3500.00
IUUC-Pfo-097177	Poecilia formosa	73.94	0.00e+00	3544.00
IUUC-Pab-097961	Pongo abelii	74.29	0.00e+00	3533.00
IUUC-Pop-099731	Populus trichocarpa	72.99	0.00e+00	3490.00
IUUC-Pca-100655	Procavia capensis	78.09	0.00e+00	1363.00
IUUC-Ppe-101199	Prunus persica	71.59	0.00e+00	3395.00
IUUC-Pva-103175	Pteropus vampyrus	79.62	0.00e+00	2950.00
IUUC-Pgr-103467	Puccinia graminis	72.07	0.00e+00	3396.00
IUUC-Ptt-103770	Puccinia triticina	74.90	0.00e+00	2571.00
IUUC-Pte-104210	Pyrenophora teres	71.93	0.00e+00	3481.00
IUUC-Pyt-104572	Pyrenophora triticirepentis	73.19	0.00e+00	2281.00
IUUC-Rno-105997	Rattus norvegicus	74.29	0.00e+00	3534.00
IUUC-Sce-106157	Saccharomyces cerevisiae	62.83	0.00e+00	3006.00
IUUC-Sha-107355	Sarcophilus harrisii	74.29	0.00e+00	3531.00
IUUC-Spo-108160	Schizosaccharomyces pombe	89.71	0.00e+00	4305.00
IUUC-Ssl-108519	Sclerotinia sclerotiorum	73.40	0.00e+00	2310.00
IUUC-Smo-109278	Selaginella moellendorffii	73.17	0.00e+00	3488.00
IUUC-Sit-110777	Setaria italica	73.57	0.00e+00	3507.00
IUUC-Sly-110889	Solanum lycopersicum	73.31	0.00e+00	3494.00
IUUC-Stu-112016	Solanum tuberosum	73.35	0.00e+00	3493.00
IUUC-Sar-113245	Sorex araneus	80.05	0.00e+00	1951.00
IUUC-Sbi-114423	Sorghum bicolor	74.21	0.00e+00	1563.00
IUUC-Sre-115077	Sporisorium reilianum	65.46	0.00e+00	3115.00
IUUC-Ssc-116211	Sus scrofa	74.77	0.00e+00	3426.00
IUUC-Tgu-116697	Taeniopygia guttata	74.38	0.00e+00	3535.00
IUUC-Tru-117984	Takifugu rubripes	73.89	0.00e+00	3548.00
IUUC-Tsy-118893	Tarsius syrichta	75.41	0.00e+00	1220.00
IUUC-Tni-120620	Tetraodon nigroviridis	76.56	0.00e+00	2697.00
IUUC-Tca-121331	Theobroma cacao	73.55	0.00e+00	3487.00
IUUC-Tre-122031	Trichoderma reesei	72.67	0.00e+00	3484.00
IUUC-Tvi-122603	Trichoderma virens	72.32	0.00e+00	3476.00
IUUC-Tae-125167	Triticum aestivum	73.64	0.00e+00	3494.00
IUUC-Tur-126772	Triticum urartu	73.96	0.00e+00	3473.00
IUUC-Tme-126899	Tuber melanosporum	73.97	0.00e+00	3545.00
IUUC-Tbe-127364	Tupaia belangeri	81.77	0.00e+00	2495.00
IUUC-Ttr-129009	Tursiops truncatus	73.82	0.00e+00	3503.00
IUUC-Vda-130015	Verticillium dahliae	72.66	0.00e+00	2296.00
IUUC-Vpa-130769	Vicugna pacos	81.63	0.00e+00	993.00
IUUC-Vvi-131030	Vitis vinifera	73.25	0.00e+00	3472.00
IUUC-Xtr-132067	Xenopus tropicalis	74.04	0.00e+00	3531.00
IUUC-Xma-134252	Xiphophorus maculatus	73.90	0.00e+00	3544.00
IUUC-Yli-134434	Yarrowia lipolytica	65.45	0.00e+00	3127.00
IUUC-Zma-134994	Zea mays	73.68	0.00e+00	3500.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence