iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111047

Ensembl Protein ID

Solyc05g010650.2.1

UniProt Accession

K4BXN7; K4BXN7_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc05g010650.2	Solyc05g010650.2.1	Solyc05g010650.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.50e-23	81.6	257	333

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e f Cp+++++M+dPv+++sG+ty+r +I +w++++ +      cP+ +q+l++++l  n +l+++i++w e+n+
   Q: 257  LYETFFCPLTKKIMEDPVTIESGVTYERDAISEWINKSDNnreeiICPKSGQKLKSRNLSTNVALKATINEWKERNE 333
           5799*******************************7777668899****************************9997 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDMSGSIDSD IILVNREKDR VSILAESLLS NISEFIKSVV SIDVEKENFI EIGSYLYRVS 60
AVIMELQIGK NATTNVIEKL QSMFENVNLA NELIKQCQKY RQKNQLIEPS IVIEQLQVVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTCAGATC ATCCCTTAAA ATGTCTTCTT CATGATTTTG GAGAATTACC ATATAACACA 60
CTTCCCTATC AATGTATTTT TACCTCCCAC AGCTTCGACA GATCGCTTAG CCCAACGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR021133--HEAT_type_2
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50077--HEAT_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101256674

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000318	Aegilops tauschii	39.19	0.00e+00	671.00
IUUC-Atr-002664	Amborella trichopoda	41.98	0.00e+00	722.00
IUUC-Aly-006424	Arabidopsis lyrata	54.30	0.00e+00	868.00
IUUC-Ath-006596	Arabidopsis thaliana	53.40	0.00e+00	822.00
IUUC-Bdi-014572	Brachypodium distachyon	42.13	0.00e+00	717.00
IUUC-Bol-016179	Brassica oleracea	53.55	0.00e+00	839.00
IUUC-Bra-017617	Brassica rapa	53.92	0.00e+00	839.00
IUUC-Hvu-047800	Hordeum vulgare	42.20	0.00e+00	728.00
IUUC-Lpe-050817	Leersia perrieri	41.04	0.00e+00	746.00
IUUC-Mac-065538	Musa acuminata	42.20	0.00e+00	694.00
IUUC-Oba-075004	Oryza barthii	40.97	0.00e+00	750.00
IUUC-Obr-076391	Oryza brachyantha	39.70	0.00e+00	635.00
IUUC-Ogl-077375	Oryza glaberrima	40.97	0.00e+00	750.00
IUUC-Ogu-078488	Oryza glumaepatula	40.97	0.00e+00	751.00
IUUC-Oin-079369	Oryza indica	44.91	0.00e+00	707.00
IUUC-Olo-080998	Oryza longistaminata	44.72	0.00e+00	667.00
IUUC-Ome-081243	Oryza meridionalis	40.68	0.00e+00	746.00
IUUC-Oni-082268	Oryza nivara	40.78	0.00e+00	751.00
IUUC-Opu-083388	Oryza punctata	41.54	0.00e+00	763.00
IUUC-Oru-084387	Oryza rufipogon	40.97	0.00e+00	753.00
IUUC-Osa-086255	Oryza sativa	41.12	0.00e+00	721.00
IUUC-Pop-099505	Populus trichocarpa	53.96	0.00e+00	980.00
IUUC-Ppe-101776	Prunus persica	57.36	0.00e+00	1059.00
IUUC-Sit-110322	Setaria italica	41.86	0.00e+00	717.00
IUUC-Stu-112113	Solanum tuberosum	95.93	0.00e+00	1895.00
IUUC-Sbi-113818	Sorghum bicolor	40.33	0.00e+00	669.00
IUUC-Tca-121365	Theobroma cacao	57.45	0.00e+00	1062.00
IUUC-Tae-124463	Triticum aestivum	41.91	0.00e+00	714.00
IUUC-Tur-126161	Triticum urartu	41.74	0.00e+00	710.00
IUUC-Vvi-131502	Vitis vinifera	61.13	0.00e+00	972.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence