iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099313

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin carboxyl-terminal hydrolase family protein

Genbank Nucleotide ID

CM000347

Gene Name

POPTRDRAFT_834165; POPTR_0011s15570g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0011s15570	POPTR_0011s15570.1	POPTR_0011s15570.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.40e-109	366.7	325	919

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDa 92
           Gl+N+gNtC+mNS+LQcL+++p+l e++l+ ++e++n +np +++gel+ ++ +l+++lw+s ++a++pr ++ +l+ +a++fsgy+q+D+
   Q: 325  GLQNMGNTCFMNSALQCLLHTPQLVEYFLQDYSEEINTQNPLGMHGELALAFGDLLRKLWSSGRTAIAPRVFKGKLALFAPQFSGYNQHDS 415
           9****************************************************************************************** PP
   S: 93   qEflaflldqleeelkkeknkpkeeeee...edkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgke 180
           qE+laflld+l+e+l++ k+kp+ e+++   e ++e  de ++++k++n+s+i+d+ qgq+ks+++c+ c ++s +++pf++lslp+p+  
   Q: 416  QELLAFLLDGLHEDLNRVKQKPYIEMKDwsgEPDEEVADECWRNHKTRNDSVIVDVCQGQYKSTLVCPICSKISITFDPFMYLSLPLPSTV 506
           ***********************99986222556777788************************************************999 PP
   S: 181  etkke...................................................................................... 185
           ++ ++                                                                                      
   Q: 507  TRIMTvtvfhgdgsglpmpctvsvlkhgncrdlgqaldsacglksgeslllaevydhkiyrmlenpfeplvsikdedhivayrfcgkgagr 597
           877769************************************************************************************* PP
   S: 186  ........................................................................................... 185
                                                                                                      
   Q: 598  kkleivhrdkctpdilkgnvgkyfgtplitymdddspsgadiylaasrllsplkracastmahsgeengflleangetssgcngqceprdq 688
           ******************************************************************************************* PP
   S: 186  .....................................................................................slqdcL 191
                                                                                                sl +cL
   Q: 689  smgntelegtssqelpfqlfltddrylsckpifkdsviksgnrikvvfewtekeqklydssnlkdlpevyhktgyrakktrqeavSLFSCL 779
           ******************************************************************************************* PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.LdlspfctspeekqkekkkYeLi 281
           e+f +ee l  ++++yc++ck++++a+kkl+l+ lP++L++hLkRfs+s+  + ++k+++ v+fp + Ldls+++ +++ +   +++YeL+
   Q: 780  EAFLTEEPLGPDDMWYCPSCKEHRQATKKLDLWMLPDILVFHLKRFSYSR--YLKNKLDTFVDFPVHnLDLSKYVKQKDGQ---SYTYELY 865
           **********************************************9977..6999*********999*******996654...8****** PP
   S: 282  avvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYkr 337
           a+ +H+G+l++GHY+a++k  +++ W+ fdDs+V++v+e+++++   s aYvlfY+r
   Q: 866  AISNHYGGLGGGHYTAFAKLIDDNrWYSFDDSRVSPVNEADIKT---SAAYVLFYRR 919
           ********************66666*******************...********98 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTMIDSRCLM ENGGGGGGEG SCLPCTPEEE KQIVEELNRE AERDLKEGNL YFVVSSRWFS 60
KWESYVGRGG VDNLDNGKSS EPQDLDVERP GPIDNSDIIE GRSSNEGDEL ELVRTLLEGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGACGGTA CTTCTCTCTC TAGCTTTCTC TCTCTAAATT CTTGCTATTA TAAATGATTT 60
TCTCCATAAC CAAAAATCAA ACCCTTAAAA TCTAGGGTTT CTTCCCTTCT CTCTCTCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF06337--DUSP
PF00443--UCH

SMART

SM00695--DUSP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0011s15570g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002991	Amborella trichopoda	55.54	0.00e+00	953.00
IUUC-Acl-008284	Aspergillus clavatus	42.64	2.00e-48	187.00
IUUC-Afl-008507	Aspergillus flavus	44.57	1.00e-49	191.00
IUUC-Afu-008878	Aspergillus fumigatus	43.80	5.00e-49	190.00
IUUC-Ani-009479	Aspergillus nidulans	42.49	2.00e-50	194.00
IUUC-Ang-009562	Aspergillus niger	43.80	8.00e-50	192.00
IUUC-Aor-009949	Aspergillus oryzae	44.57	1.00e-49	191.00
IUUC-Ate-010323	Aspergillus terreus	43.02	1.00e-48	188.00
IUUC-Bgr-012277	Blumeria graminis	43.53	7.00e-58	219.00
IUUC-Bci-013993	Botrytis cinerea	43.38	4.00e-56	213.00
IUUC-Bdi-014013	Brachypodium distachyon	55.68	0.00e+00	981.00
IUUC-Cel-018203	Caenorhabditis elegans	53.08	4.00e-61	229.00
IUUC-Cho-024595	Choloepus hoffmanni	38.59	1.00e-106	380.00
IUUC-Cgl-026741	Colletotrichum gloeosporioides	43.58	2.00e-55	211.00
IUUC-Cne-026852	Cryptococcus neoformans	35.38	4.00e-70	259.00
IUUC-Dno-029316	Dasypus novemcinctus	36.94	4.00e-143	501.00
IUUC-Eca-034012	Equus caballus	41.80	7.00e-122	431.00
IUUC-Ggr-039740	Gaeumannomyces graminis	43.41	2.00e-55	211.00
IUUC-Gma-043077	Glycine max	65.33	0.00e+00	1180.00
IUUC-Lpe-051424	Leersia perrieri	55.15	0.00e+00	961.00
IUUC-Laf-053803	Loxodonta africana	36.60	5.00e-141	494.00
IUUC-Meu-056749	Macropus eugenii	36.32	2.00e-89	322.00
IUUC-Mor-056985	Magnaporthe oryzae	37.73	4.00e-56	213.00
IUUC-Mpo-057486	Magnaporthe poae	44.96	3.00e-56	214.00
IUUC-Mtr-058138	Medicago truncatula	67.07	0.00e+00	1210.00
IUUC-Mmu-063960	Mus musculus	37.16	5.00e-145	508.00
IUUC-Nfi-068330	Neosartorya fischeri	44.19	1.00e-49	191.00
IUUC-Ncr-068879	Neurospora crassa	42.75	7.00e-55	209.00
IUUC-Opr-070740	Ochotona princeps	42.93	2.00e-128	452.00
IUUC-Oba-075427	Oryza barthii	51.55	0.00e+00	843.00
IUUC-Obr-076902	Oryza brachyantha	54.71	0.00e+00	939.00
IUUC-Ogu-078422	Oryza glumaepatula	51.48	0.00e+00	846.00
IUUC-Olo-080315	Oryza longistaminata	55.15	0.00e+00	897.00
IUUC-Ome-081271	Oryza meridionalis	55.54	0.00e+00	947.00
IUUC-Oni-082834	Oryza nivara	51.37	0.00e+00	844.00
IUUC-Opu-083691	Oryza punctata	53.51	0.00e+00	931.00
IUUC-Oru-084820	Oryza rufipogon	51.48	0.00e+00	846.00
IUUC-Osa-086139	Oryza sativa	55.32	0.00e+00	941.00
IUUC-Pca-100851	Procavia capensis	38.04	2.00e-90	326.00
IUUC-Rno-106081	Rattus norvegicus	36.61	3.00e-145	508.00
IUUC-Sja-107748	Schizosaccharomyces japonicus	28.98	8.00e-90	324.00
IUUC-Sit-109948	Setaria italica	56.25	0.00e+00	971.00
IUUC-Sly-111746	Solanum lycopersicum	63.57	0.00e+00	1155.00
IUUC-Stu-112671	Solanum tuberosum	62.94	0.00e+00	1160.00
IUUC-Sbi-114874	Sorghum bicolor	55.60	0.00e+00	976.00
IUUC-Sre-115130	Sporisorium reilianum	50.75	2.00e-71	264.00
IUUC-Tsy-119414	Tarsius syrichta	48.48	2.00e-79	290.00
IUUC-Tca-121001	Theobroma cacao	68.64	0.00e+00	1305.00
IUUC-Tae-125295	Triticum aestivum	54.74	0.00e+00	962.00
IUUC-Tme-127062	Tuber melanosporum	30.86	5.00e-66	246.00
IUUC-Uma-129498	Ustilago maydis	49.61	1.00e-66	248.00
IUUC-Vvi-131010	Vitis vinifera	67.89	0.00e+00	1274.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence