iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058344

Ensembl Protein ID

AES72512

UniProt Accession

G7J7F1; G7J7F1_MEDTR

Genbank Protein ID

AES72512.1

Protein Name

RING-H2 finger protein ATL4O

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g091620

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g091620	AES72512	AES72512

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-08	35.9	127	169

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f+d+  +++lp C H+fh+dC+ +w       + +++CPlCr
   Q: 127  CAVCLLEFEDHdyVRTLPlCSHTFHLDCIDAW------LRSHANCPLCR 169
           ****888844444999****************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MISPAQSPMH HHQAQPPYSP LISKPSSSGV DFSPPLIAMV VVVAAAFVLV TYSRLITRHL 60
SPPIHRLIQR FHRPPPSSSS LGDIESLQYD STSFETPLTY GLDESIIKTI PFFIYTTKYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCTCTTCT CTTTCCACGT TTGAGAGCAA GTCTCTCTCA CTCTCAATAA CACAAACATC 60
ACACATAAAT AAATCTCTAT TCTTTTCCCT CCCCCTGTTA CCATTCTCAT CAACCATGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g091620

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002525	Amborella trichopoda	51.69	2.00e-57	215.00
IUUC-Aly-005738	Arabidopsis lyrata	53.47	2.00e-63	235.00
IUUC-Ath-006761	Arabidopsis thaliana	54.36	3.00e-64	238.00
IUUC-Bdi-014398	Brachypodium distachyon	43.35	1.00e-28	120.00
IUUC-Bol-015520	Brassica oleracea	50.85	1.00e-59	223.00
IUUC-Bra-017477	Brassica rapa	51.18	4.00e-60	224.00
IUUC-Gma-043732	Glycine max	65.39	2.00e-102	365.00
IUUC-Lpe-051662	Leersia perrieri	40.49	8.00e-25	107.00
IUUC-Mac-065095	Musa acuminata	44.40	7.00e-43	166.00
IUUC-Ogu-077985	Oryza glumaepatula	39.42	5.00e-21	94.70
IUUC-Oin-079093	Oryza indica	39.90	4.00e-19	88.60
IUUC-Opu-083940	Oryza punctata	41.59	4.00e-21	95.10
IUUC-Oru-084986	Oryza rufipogon	34.62	3.00e-13	69.30
IUUC-Pop-099495	Populus trichocarpa	56.67	2.00e-72	265.00
IUUC-Ppe-101726	Prunus persica	56.35	4.00e-78	284.00
IUUC-Sit-109801	Setaria italica	39.60	2.00e-25	109.00
IUUC-Sly-111253	Solanum lycopersicum	60.19	2.00e-70	258.00
IUUC-Stu-112012	Solanum tuberosum	60.06	2.00e-70	258.00
IUUC-Sbi-114003	Sorghum bicolor	36.04	2.00e-26	112.00
IUUC-Tca-120931	Theobroma cacao	64.15	1.00e-93	336.00
IUUC-Tae-123946	Triticum aestivum	44.22	6.00e-27	114.00
IUUC-Vvi-131492	Vitis vinifera	55.78	8.00e-85	306.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence