iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111293

Ensembl Protein ID

Solyc11g062260.1.1

UniProt Accession

K4D937; K4D937_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g062260.1	Solyc11g062260.1.1	Solyc11g062260.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.30e-07	30.8	195	235

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+ ++  kd+ ++lpC+Hv+ha C  +w       s +  CP+C
   Q: 195  CVICQMEYkrKDQQVTLPCKHVYHAGCGSRW------LSINKACPIC 235
           ****999966555888***************......********** PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MNWNQQTEIY YTNGAMPYNS IGSFMDFFGG VTYDHVNYIF ADPPYAQESL YPSISTNPYK 60
FGYSEAGSFS YYDYDREYVV NDHVSGIEEH DRHLENPSTT TVNVAANVHR EEISGSNSLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTGGA ATCAGCAAAC GGAAATTTAT TATACAAATG GTGCTATGCC TTATAATTCA 60
ATTGGAAGTT TTATGGATTT CTTTGGAGGT GTTACGTATG ACCATGTTAA TTATATATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0048437--P:floral organ development
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101255658

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000725	Aegilops tauschii	50.79	7.00e-57	213.00
IUUC-Atr-002639	Amborella trichopoda	50.00	4.00e-60	223.00
IUUC-Bdi-014877	Brachypodium distachyon	51.22	2.00e-56	211.00
IUUC-Gma-043316	Glycine max	61.29	2.00e-83	300.00
IUUC-Hvu-047311	Hordeum vulgare	50.79	1.00e-53	202.00
IUUC-Lpe-051357	Leersia perrieri	49.60	3.00e-60	224.00
IUUC-Mtr-058603	Medicago truncatula	58.04	2.00e-82	298.00
IUUC-Mac-064965	Musa acuminata	48.13	4.00e-55	207.00
IUUC-Oba-075640	Oryza barthii	51.79	1.00e-58	219.00
IUUC-Obr-076687	Oryza brachyantha	51.39	2.00e-58	218.00
IUUC-Ogl-077270	Oryza glaberrima	52.19	2.00e-59	221.00
IUUC-Ogu-078788	Oryza glumaepatula	52.19	2.00e-59	222.00
IUUC-Oin-079201	Oryza indica	52.19	2.00e-59	221.00
IUUC-Olo-080862	Oryza longistaminata	51.81	7.00e-57	213.00
IUUC-Ome-081787	Oryza meridionalis	51.79	9.00e-59	219.00
IUUC-Oni-082723	Oryza nivara	52.19	2.00e-59	221.00
IUUC-Opu-084164	Oryza punctata	51.60	3.00e-58	217.00
IUUC-Oru-084238	Oryza rufipogon	52.19	3.00e-59	221.00
IUUC-Osa-085989	Oryza sativa	52.19	2.00e-59	221.00
IUUC-Olu-087709	Ostreococcus lucimarinus	43.01	2.00e-15	72.80
IUUC-Ppa-095451	Physcomitrella patens	44.72	3.00e-26	111.00
IUUC-Pop-098885	Populus trichocarpa	58.47	2.00e-66	244.00
IUUC-Ppe-101397	Prunus persica	61.04	2.00e-88	317.00
IUUC-Smo-108692	Selaginella moellendorffii	52.69	1.00e-24	103.00
IUUC-Sit-110753	Setaria italica	52.80	7.00e-68	249.00
IUUC-Stu-112116	Solanum tuberosum	95.93	9.00e-144	501.00
IUUC-Sbi-114143	Sorghum bicolor	50.38	7.00e-66	242.00
IUUC-Tca-121840	Theobroma cacao	60.32	3.00e-83	300.00
IUUC-Tae-123276	Triticum aestivum	50.79	5.00e-57	214.00
IUUC-Tur-125974	Triticum urartu	49.60	3.00e-56	211.00
IUUC-Vvi-131594	Vitis vinifera	63.11	7.00e-91	325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence