iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007113

UUCD1 version

UUC-ArT-00378

Ensembl Protein ID

AT5G60710.1

UniProt Accession

Q9FF49; Q9FF49_ARATH

Genbank Protein ID

AED97369.1; BAB09844.1

Protein Name

Retroelement pol polyprotein-like; Zinc finger (C3HC4-type RING finger) family protein

Genbank Nucleotide ID

CP002688; AB005246

Gene Name

MUP24.2; MUP24_2; At5g60710

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G60710	AT5G60710.1	AT5G60710.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-06	28.1	72	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg....plvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           CaiCl+ +k g     ++  C H fh++C+  ++      + ++++CP+Cr
   Q: 72   CAICLTAMKAGqghaIFTAECSHSFHFQCItTNV------KHGNQICPVCR 116
           ********666666699999**********8888......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP 60
RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC ITTNVKHGNQ ICPVCRAKWN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTGGTATA AATCCCAAGT TTTCATGATT AAACACATTT ACCAAATTAC CCTTCACTCA 60
TCCTAAAAAA AAAGGTCAAA AACTTCACCA CCGTCTCTCT CTCTCCTTCT CTCTTCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032838--Vwaint_dom
IPR002035--VWF_A
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50234--VWFA
PS50089--ZF_RING_2

Pfam

PF00092--VWA
PF14624--Vwaint
PF17123--zf-RING_11

SMART

SM00184--RING
SM00327--VWA

Gene Ontology

GO:0005886--C:plasma membrane
GO:0008270--F:zinc ion binding

KEGG

ath:AT5G60710

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000514	Aegilops tauschii	52.00	0.00e+00	686.00
IUUC-Ago-007705	Ashbya gossypii	48.94	1.00e-06	47.00
IUUC-Bdi-014237	Brachypodium distachyon	51.28	0.00e+00	637.00
IUUC-Bol-015427	Brassica oleracea	81.81	0.00e+00	1011.00
IUUC-Bra-017571	Brassica rapa	82.02	0.00e+00	1008.00
IUUC-Cre-022760	Chlamydomonas reinhardtii	31.11	6.00e-04	39.70
IUUC-Cne-026825	Cryptococcus neoformans	28.38	1.00e-20	95.50
IUUC-Hvu-047585	Hordeum vulgare	51.90	0.00e+00	697.00
IUUC-Lpe-051426	Leersia perrieri	54.22	0.00e+00	721.00
IUUC-Oba-075359	Oryza barthii	54.30	0.00e+00	721.00
IUUC-Obr-076924	Oryza brachyantha	53.61	0.00e+00	719.00
IUUC-Ogl-077314	Oryza glaberrima	56.15	0.00e+00	684.00
IUUC-Ogu-078254	Oryza glumaepatula	54.30	0.00e+00	721.00
IUUC-Oin-079660	Oryza indica	54.17	0.00e+00	720.00
IUUC-Olo-080750	Oryza longistaminata	54.00	0.00e+00	706.00
IUUC-Oni-083041	Oryza nivara	54.17	0.00e+00	719.00
IUUC-Opu-084154	Oryza punctata	54.63	0.00e+00	722.00
IUUC-Oru-084708	Oryza rufipogon	54.03	0.00e+00	717.00
IUUC-Osa-085739	Oryza sativa	54.03	0.00e+00	717.00
IUUC-Ppe-101750	Prunus persica	46.73	7.00e-150	523.00
IUUC-Sit-109961	Setaria italica	47.97	2.00e-141	495.00
IUUC-Sly-111310	Solanum lycopersicum	61.08	0.00e+00	813.00
IUUC-Stu-112794	Solanum tuberosum	60.66	0.00e+00	805.00
IUUC-Sbi-114156	Sorghum bicolor	53.32	0.00e+00	697.00
IUUC-Tca-121823	Theobroma cacao	61.45	0.00e+00	835.00
IUUC-Tae-123973	Triticum aestivum	51.14	4.00e-177	614.00
IUUC-Tur-126698	Triticum urartu	53.68	3.00e-176	611.00
IUUC-Vvi-130879	Vitis vinifera	64.11	0.00e+00	829.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence