iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111499

Ensembl Protein ID

Solyc06g007230.1.1

UniProt Accession

K4C3A6; K4C3A6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g007230.1	Solyc06g007230.1.1	Solyc06g007230.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.00e-06	27.4	119	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+ ++d+   + lp C H+fh +C+ +w         + +CP+Cr
   Q: 119  CMICLSLLEDEdvCRKLPkCSHAFHVECIDMW------LHSHSTCPICR 161
           *******966544667889*************......999*******8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MFTSSSLPFP QITFNSLKNI IHNILSYNSN IMLAAIISLL LVILFILLLH IYAKWFLVQT 60
RRRSTRNSLS SPFHNFHSFN IVDNTSFASN FPTKGLERSM ISSIPLFIYK EESNEELECM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCACTT CTTCTTCTCT TCCATTTCCA CAAATTACTT TCAACTCACT AAAGAACATC 60
ATCCATAATA TCTTATCTTA TAATAGCAAC ATTATGCTAG CAGCAATAAT ATCACTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:104647767

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005886	Arabidopsis lyrata	63.16	3.00e-21	95.10
IUUC-Ath-007163	Arabidopsis thaliana	59.30	2.00e-21	95.50
IUUC-Bol-016350	Brassica oleracea	59.52	3.00e-21	95.10
IUUC-Bra-016698	Brassica rapa	50.51	4.00e-21	94.40
IUUC-Gma-043667	Glycine max	57.00	7.00e-25	106.00
IUUC-Lpe-051663	Leersia perrieri	34.65	1.00e-19	89.00
IUUC-Mtr-058692	Medicago truncatula	56.07	1.00e-31	129.00
IUUC-Pop-098906	Populus trichocarpa	56.89	6.00e-35	140.00
IUUC-Ppe-101809	Prunus persica	48.85	1.00e-28	119.00
IUUC-Stu-112903	Solanum tuberosum	92.62	2.00e-57	213.00
IUUC-Tca-121048	Theobroma cacao	57.23	3.00e-33	134.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence