iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017554

Ensembl Protein ID

Bra002384.1-P

UniProt Accession

M4CDV3; M4CDV3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra002384	Bra002384.1	Bra002384.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.20e-108	362.0	278	870

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           tGl+NlgNtC+mNS LQcL+++p+l +++l ++++++n enp ++kge++ ++ +l+++lw    + v+pr+++++l+++a++f+g++q+D+qE+l
   Q: 278  TGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSREINLENPLGMKGEIALAFGDLLRSLWAPGASTVAPRTFKAKLARFAPQFTGFNQHDSQELL 373
           7*********************************************************************************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeed...kselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.... 185
           aflld+l+e+l++ knkp+ e+++ d   ++e  de ++++  +n+s+i+d+ qgq+ks+++c+ c++vs+ ++pf++lslp+p  + + +     
   Q: 374  AFLLDGLHEDLNRVKNKPYVEAKDGDgrpDEEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDltvm 469
           **********************998822244556669***********************************************9997766699** PP
   S: 186  ................................................................................................ 185
                                                                                                           
   Q: 470  sadggslpvsltvnvpkfgkfedlqkalviacslpddetllvtevynnrilrfldeptdsltlirdgdklvvyrlkkdadnsplivfmhqkleeqv 565
           ************************************************************************************************ PP
   S: 186  ................................................................................................ 185
                                                                                                           
   Q: 566  ilgkssptwkafgiplvsrlsdvengfdvekmylkllssfkmptelftenlenpikeeaidkevtdgttsvedtnstnvketaeslpdpdpvlrly 661
           ************************************************************************************************ PP
   S: 186  ...............................................................slqdcLesftkeeelegenkyycekckkkqeae 218
                                                                          sl +cLe+f kee l  ++++yc+ ck++++a 
   Q: 662  ltddrgssieseilkekpvnnkskrlnvlarwpvkeldvydtcllsslpevskfgtkrpqetvSLYKCLEAFLKEEPLGPDDMWYCPGCKEHRQAI 757
           ************************************************************************************************ PP
   S: 219  kklklkklPevLilhLkRfsfseeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgkWllfdDsk 313
           kkl+l++lPe+L++hLkRfs+s+   +++k++ +v+fp+  Ldls++ + ++ +   +++Y L+a+ +H+Gs+++GHY+ayv +  ++W+ fdDs+
   Q: 758  KKLDLWRLPEILVIHLKRFSYSR--FMKNKLEAYVDFPIDgLDLSSYISYTNGQT--TYRYMLYAISNHYGSMGGGHYTAYVHHGGDRWYDFDDSQ 849
           *******************9977..799********************9966665..9**************************9999******** PP
   S: 314  VtevkeeevleetgstaYvlfYkr 337
           V+++++e++++   s aYvlfYkr
   Q: 850  VNKISQEKIKT---SAAYVLFYKR 870
           ***********...********98 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSVASPEESP DSTHRIDSLN GEQSVYFVPL RWWKDAQEST TSESVDKREV LYTATTGSSY 60
GGPMKLINNI FNSDILFDLR REGDGLLNGE TGEASVSGRD FALVSSDMWL QALKWHHDNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGTGG CATCCCCCGA GGAATCTCCC GATTCAACTC ACCGGATCGA TTCGCTCAAC 60
GGCGAGCAGA GCGTCTACTT CGTCCCCTTG AGGTTTCTCC TCTCCCGCCT CTCCAATCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000058	Aegilops tauschii	47.89	0.00e+00	679.00
IUUC-Atr-002955	Amborella trichopoda	55.44	0.00e+00	881.00
IUUC-Aly-005456	Arabidopsis lyrata	88.03	0.00e+00	1530.00
IUUC-Ath-007677	Arabidopsis thaliana	86.79	0.00e+00	1489.00
IUUC-Bdi-014404	Brachypodium distachyon	50.00	0.00e+00	793.00
IUUC-Bol-015699	Brassica oleracea	97.71	0.00e+00	1693.00
IUUC-Gma-043629	Glycine max	62.51	0.00e+00	1065.00
IUUC-Hvu-047108	Hordeum vulgare	51.01	0.00e+00	707.00
IUUC-Lpe-051047	Leersia perrieri	54.36	0.00e+00	844.00
IUUC-Mtr-058489	Medicago truncatula	63.56	0.00e+00	1069.00
IUUC-Mac-065227	Musa acuminata	50.25	0.00e+00	761.00
IUUC-Oba-075553	Oryza barthii	47.11	0.00e+00	764.00
IUUC-Obr-076416	Oryza brachyantha	53.04	0.00e+00	816.00
IUUC-Ogl-077583	Oryza glaberrima	47.11	0.00e+00	764.00
IUUC-Ogu-078391	Oryza glumaepatula	49.61	0.00e+00	794.00
IUUC-Oin-079768	Oryza indica	51.56	0.00e+00	823.00
IUUC-Olo-080319	Oryza longistaminata	50.79	0.00e+00	771.00
IUUC-Ome-081819	Oryza meridionalis	51.68	0.00e+00	823.00
IUUC-Oni-082947	Oryza nivara	49.89	0.00e+00	806.00
IUUC-Opu-083846	Oryza punctata	48.38	0.00e+00	739.00
IUUC-Oru-084273	Oryza rufipogon	49.78	0.00e+00	803.00
IUUC-Osa-085641	Oryza sativa	47.23	0.00e+00	768.00
IUUC-Olu-087717	Ostreococcus lucimarinus	40.25	1.00e-126	446.00
IUUC-Psi-093942	Pelodiscus sinensis	41.59	7.00e-125	441.00
IUUC-Pop-099333	Populus trichocarpa	67.03	0.00e+00	860.00
IUUC-Ppe-102062	Prunus persica	66.25	0.00e+00	808.00
IUUC-Smo-108686	Selaginella moellendorffii	51.71	1.00e-168	585.00
IUUC-Sit-109930	Setaria italica	53.56	0.00e+00	871.00
IUUC-Sly-111891	Solanum lycopersicum	62.79	0.00e+00	1009.00
IUUC-Sbi-114549	Sorghum bicolor	53.20	0.00e+00	832.00
IUUC-Tca-121598	Theobroma cacao	64.24	0.00e+00	1098.00
IUUC-Tae-125811	Triticum aestivum	52.30	0.00e+00	820.00
IUUC-Tur-126478	Triticum urartu	48.27	0.00e+00	689.00
IUUC-Vvi-131066	Vitis vinifera	64.67	0.00e+00	1139.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence