iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00017373	F10G7.10a	F10G7.10a
WBGene00017373	F10G7.10b	F10G7.10b
WBGene00017373	F10G7.10c	F10G7.10c

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.60e-06	27.7	1308	1436

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiC.....................................................................ledfkd...gplvlp.........C 17
           C+iC                                                                     +    +    ++v+p         C
   Q: 1308 CPICgeqnapntvenpfgmlaklstnficeeqidasintiddllkfdeyehvsanrlqsetrrrffskrrqatF----EnqdIVKVNPplvgtdlktC 1401
           99998888888888888888888888888888888888877777766666666555555554444444432221....0222133333333346777* PP
   S: 18   gHvfhadClqkw......pglknssskefrCPlCr 46
           gH+ h  C++++       ++ +  ++e  CP Cr
   Q: 1402 GHAAHIACFNAYraslydGHQRSTDRREVGCPMCR 1436
           ************998876555556666667****8 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MPPGEPVGSS AQGERDFISK WLHQTLKASD WYVKPIVNFD GDKSDMDEVY KAVKFWRDLA 60
LELKSKNYPL AEGIDNYQSF DEETRKKAHM LDDFLDGFID EELQEDEKTF EILRVLIAQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTCTGCGT CTATGCTCTC TTGCCTCCTG CCTTCTTCCA TACTCTTTTC CTCCGGTATT 60
TCTCATTTTT AAAATATACA TTTCCAATTT TATAACTTTA TTTTCAGATA AATAGCAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR013083--Znf_RING/FYVE/PHD
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0071596--P:ubiquitin-dependent protein catabolic process via the N-end rule pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002071	Ailuropoda melanoleuca	34.87	1.00e-27	117.00
IUUC-Apl-003859	Anas platyrhynchos	36.84	4.00e-28	119.00
IUUC-Aca-004832	Anolis carolinensis	34.87	2.00e-27	116.00
IUUC-Bol-015669	Brassica oleracea	28.26	6.00e-16	79.70
IUUC-Bra-017621	Brassica rapa	29.47	2.00e-17	84.70
IUUC-Cja-019761	Callithrix jacchus	34.87	5.00e-28	118.00
IUUC-Cpo-021462	Cavia porcellus	35.53	3.00e-26	112.00
IUUC-Cin-025110	Ciona intestinalis	26.77	3.00e-54	206.00
IUUC-Csv-026296	Ciona savignyi	39.87	3.00e-23	101.00
IUUC-Dno-029345	Dasypus novemcinctus	34.87	5.00e-28	118.00
IUUC-Dme-032215	Drosophila melanogaster	25.49	4.00e-56	213.00
IUUC-Gmo-038976	Gadus morhua	36.54	5.00e-27	115.00
IUUC-Hvu-047101	Hordeum vulgare	32.30	2.00e-20	90.90
IUUC-Itr-048464	Ictidomys tridecemlineatus	31.58	2.00e-28	120.00
IUUC-Lch-050205	Latimeria chalumnae	24.80	9.00e-56	211.00
IUUC-Mga-060032	Meleagris gallopavo	36.84	4.00e-28	119.00
IUUC-Mdo-062136	Monodelphis domestica	34.21	3.00e-27	116.00
IUUC-Mac-064773	Musa acuminata	30.52	7.00e-18	86.30
IUUC-Ola-086515	Oryzias latipes	36.84	6.00e-29	121.00
IUUC-Pab-098783	Pongo abelii	34.87	1.00e-27	116.00
IUUC-Pop-099496	Populus trichocarpa	32.03	2.00e-17	84.70
IUUC-Pca-101009	Procavia capensis	35.53	7.00e-28	119.00
IUUC-Sha-107406	Sarcophilus harrisii	23.72	9.00e-28	118.00
IUUC-Sly-111286	Solanum lycopersicum	33.12	5.00e-18	86.70
IUUC-Sar-112948	Sorex araneus	35.53	3.00e-28	119.00
IUUC-Tni-120560	Tetraodon nigroviridis	37.50	8.00e-30	124.00
IUUC-Tca-121077	Theobroma cacao	31.65	4.00e-14	73.60
IUUC-Tbe-127964	Tupaia belangeri	36.30	2.00e-27	116.00
IUUC-Vvi-131290	Vitis vinifera	30.36	6.00e-17	82.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence