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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-105353
UUCD1 version UUC-RaN-00356
Ensembl Protein ID ENSRNOP00000070617.1
UniProt Accession A0A0G2JYE1; A0A0G2JYE1_RAT
Genbank Protein ID ENSRNOP00000070617
Protein Name Tripartite motif-containing 30C
Genbank Nucleotide ID AC112864
Gene Name Trim30c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000031202.5 ENSRNOT00000078058.1 ENSRNOP00000070617.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/U-box 8.70e-06 26.1 9 73
E3 activity/RING/RING 3.40e-09 37.5 15 59
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltl 61
    + ee Cp+ lel ++Pv + +++++ r++I +s+++ +cPv+r + ++l Pn +
   Q: 9 IKEEVTCPLCLELLKEPVSADCNHSFCRACITPNYESNRNtegqgSCPVCRVRYLFRNLRPNQHV 73
    67899***************************9997777788999**************999754 PP
   


   E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
    C++Cle +k+ p++ +C+H f++ C+ ++ +++++ ++ +CP+Cr
   Q: 15 CPLCLELLKE-PVSADCNHSFCRACItPNY-ESNRNTEGQGSCPVCR 59
    ********99.***************8888.99*************8 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
MASSVLEMIK EEVTCPLCLE LLKEPVSADC NHSFCRACIT PNYESNRNTE GQGSCPVCRV 60
RYLFRNLRPN QHVAKIVESL KGFKSIPEKE QKVNVCAQHG EKLQLFCTKE MRAICWVCER 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-105353|E3,U-box;E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCAAAGTCTT AGCTTTCATT TCTCTCCTGA CTCACCAGCG GACCAGCTTA GCGACTAAAT 60
TCTCAGGGCA TAGACTTTGG CCTGAGTTTG CTTCTTTCCA CAAATTCTGT GTCACTTGGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-105353|E3,U-box;E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR010908--Longin_dom
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG rno:102554102
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Mmu-063337 Mus musculus 70.52 0.00e+00 699.00
Created Date 25-Jun-2017

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