iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027471

Ensembl Protein ID

ENSDARP00000028109.7

UniProt Accession

F1Q6C8; F1Q6C8_DANRE

Genbank Protein ID

ENSDARP00000028109

Protein Name

DDB1- and CUL4-associated factor 13

Genbank Nucleotide ID

CR925804

Gene Name

dcaf13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000002267.7	ENSDART00000015139.7	ENSDARP00000028109.7

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-22	78.0	64	103

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d+++c++    +  +++sG+ Dg +kvW+l +  +++
   Q: 64   GHRDGISCISKhaKSlSTVISGACDGEVKVWNLPKRECTR 103
           8********7347444579*************99888876 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MKVKVLCRNP DDYVRETTRD IQRVPRNYDP TLHPFEVPRE YTRALNATKL ERVFAKPFVA 60
SLDGHRDGIS CISKHAKSLS TVISGACDGE VKVWNLPKRE CTRTVQAHEG FVRGICSRFC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCTGCGAT TACAGAACCC GGATGTGTTT CTGCTAAAGT GACGTCAAAT TAGTGCGCGG 60
TCCGTCATAC AAACACATGG TCTTGCGTTT TCTCAAAGGC AACATATATC TAAACAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	73.48	0.00e+00	725.00
IUUC-Atr-002799	Amborella trichopoda	46.46	5.00e-128	451.00
IUUC-Apl-003675	Anas platyrhynchos	76.12	0.00e+00	689.00
IUUC-Aca-004792	Anolis carolinensis	74.83	0.00e+00	738.00
IUUC-Aly-005998	Arabidopsis lyrata	46.24	6.00e-128	450.00
IUUC-Ath-007526	Arabidopsis thaliana	46.02	7.00e-127	447.00
IUUC-Ago-007774	Ashbya gossypii	46.88	5.00e-123	434.00
IUUC-Acl-008024	Aspergillus clavatus	43.08	3.00e-107	382.00
IUUC-Afu-008930	Aspergillus fumigatus	43.90	1.00e-107	383.00
IUUC-Ani-009370	Aspergillus nidulans	43.33	1.00e-108	386.00
IUUC-Ang-009827	Aspergillus niger	43.81	2.00e-110	392.00
IUUC-Aor-010060	Aspergillus oryzae	41.94	8.00e-105	374.00
IUUC-Ate-010434	Aspergillus terreus	43.09	3.00e-91	328.00
IUUC-Ame-011967	Astyanax mexicanus	84.02	0.00e+00	797.00
IUUC-Bgr-011989	Blumeria graminis	44.91	3.00e-112	399.00
IUUC-Bta-013291	Bos taurus	55.90	5.00e-146	511.00
IUUC-Bci-013868	Botrytis cinerea	43.90	1.00e-108	386.00
IUUC-Bdi-014343	Brachypodium distachyon	46.24	3.00e-119	422.00
IUUC-Bol-015740	Brassica oleracea	43.81	6.00e-118	417.00
IUUC-Bra-016689	Brassica rapa	43.81	1.00e-116	413.00
IUUC-Cel-018536	Caenorhabditis elegans	51.10	1.00e-124	439.00
IUUC-Cja-018779	Callithrix jacchus	74.61	0.00e+00	742.00
IUUC-Cfa-020105	Canis familiaris	75.06	0.00e+00	744.00
IUUC-Cpo-021538	Cavia porcellus	73.71	0.00e+00	711.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	49.69	3.00e-46	177.00
IUUC-Csa-023492	Chlorocebus sabaeus	74.61	0.00e+00	741.00
IUUC-Cho-024497	Choloepus hoffmanni	61.76	2.00e-122	432.00
IUUC-Cin-025524	Ciona intestinalis	61.99	3.00e-171	594.00
IUUC-Csv-026197	Ciona savignyi	62.11	8.00e-174	603.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	40.80	2.00e-96	346.00
IUUC-Cne-026840	Cryptococcus neoformans	38.00	6.00e-82	299.00
IUUC-Cme-027111	Cyanidioschyzon merolae	35.66	2.00e-72	266.00
IUUC-Dno-029790	Dasypus novemcinctus	73.96	9.00e-172	596.00
IUUC-Dor-030971	Dipodomys ordii	60.67	1.00e-165	576.00
IUUC-Dse-031563	Dothistroma septosporum	44.99	1.00e-109	390.00
IUUC-Dme-032161	Drosophila melanogaster	59.59	7.00e-166	577.00
IUUC-Ete-033127	Echinops telfairi	70.25	0.00e+00	687.00
IUUC-Eca-033531	Equus caballus	74.29	0.00e+00	703.00
IUUC-Eeu-034663	Erinaceus europaeus	63.98	2.00e-174	605.00
IUUC-Fca-036258	Felis catus	75.06	0.00e+00	745.00
IUUC-Fal-037456	Ficedula albicollis	75.28	0.00e+00	697.00
IUUC-Fox-038025	Fusarium oxysporum	44.32	2.00e-108	385.00
IUUC-Fso-038344	Fusarium solani	43.56	1.00e-101	363.00
IUUC-Gmo-039643	Gadus morhua	80.22	0.00e+00	786.00
IUUC-Ggr-039816	Gaeumannomyces graminis	44.60	5.00e-106	377.00
IUUC-Gga-040143	Gallus gallus	75.51	0.00e+00	723.00
IUUC-Gac-041665	Gasterosteus aculeatus	80.83	0.00e+00	772.00
IUUC-Gma-043073	Glycine max	47.80	3.00e-126	445.00
IUUC-Ggo-045058	Gorilla gorilla	74.38	0.00e+00	740.00
IUUC-Hsa-046843	Homo sapiens	74.38	0.00e+00	736.00
IUUC-Hvu-047654	Hordeum vulgare	47.68	6.00e-72	264.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	74.38	0.00e+00	738.00
IUUC-Kpa-049232	Komagataella pastoris	48.25	8.00e-126	443.00
IUUC-Lch-050542	Latimeria chalumnae	74.58	0.00e+00	764.00
IUUC-Lpe-051622	Leersia perrieri	46.68	3.00e-122	431.00
IUUC-Loc-052674	Lepisosteus oculatus	72.09	0.00e+00	716.00
IUUC-Lma-053108	Leptosphaeria maculans	43.50	3.00e-109	389.00
IUUC-Laf-053385	Loxodonta africana	75.06	0.00e+00	729.00
IUUC-Mcc-055151	Macaca mulatta	74.16	0.00e+00	739.00
IUUC-Meu-056230	Macropus eugenii	74.29	1.00e-101	363.00
IUUC-Mor-057013	Magnaporthe oryzae	42.46	7.00e-101	360.00
IUUC-Mpo-057530	Magnaporthe poae	45.18	6.00e-108	384.00
IUUC-Mtr-058187	Medicago truncatula	47.57	2.00e-126	446.00
IUUC-Mla-058964	Melampsora laricipopulina	40.85	3.00e-94	339.00
IUUC-Mga-059712	Meleagris gallopavo	75.59	0.00e+00	687.00
IUUC-Mvi-060370	Microbotryum violaceum	40.49	4.00e-64	239.00
IUUC-Mmr-061340	Microcebus murinus	70.82	0.00e+00	684.00
IUUC-Mdo-062978	Monodelphis domestica	73.26	0.00e+00	726.00
IUUC-Mmu-063439	Mus musculus	75.28	0.00e+00	740.00
IUUC-Mac-065129	Musa acuminata	46.10	7.00e-127	447.00
IUUC-Mpu-066548	Mustela putorius furo	67.57	2.00e-165	575.00
IUUC-Mlu-067660	Myotis lucifugus	75.06	0.00e+00	745.00
IUUC-Nfi-068455	Neosartorya fischeri	45.14	8.00e-111	394.00
IUUC-Ncr-068848	Neurospora crassa	39.87	1.00e-97	350.00
IUUC-Nle-069923	Nomascus leucogenys	74.38	0.00e+00	738.00
IUUC-Opr-070279	Ochotona princeps	59.47	2.00e-65	243.00
IUUC-Ont-072234	Oreochromis niloticus	80.45	0.00e+00	783.00
IUUC-Oan-073713	Ornithorhynchus anatinus	71.64	7.00e-91	326.00
IUUC-Ocu-073782	Oryctolagus cuniculus	74.38	0.00e+00	741.00
IUUC-Oba-075161	Oryza barthii	46.68	1.00e-122	433.00
IUUC-Obr-076868	Oryza brachyantha	46.68	5.00e-122	431.00
IUUC-Ogl-077062	Oryza glaberrima	46.68	1.00e-122	433.00
IUUC-Ogu-078308	Oryza glumaepatula	46.68	1.00e-122	433.00
IUUC-Oin-079378	Oryza indica	46.68	1.00e-122	433.00
IUUC-Olo-080638	Oryza longistaminata	44.69	5.00e-113	401.00
IUUC-Oni-082368	Oryza nivara	46.68	1.00e-122	433.00
IUUC-Opu-083628	Oryza punctata	46.68	1.00e-122	433.00
IUUC-Oru-085226	Oryza rufipogon	46.46	3.00e-122	431.00
IUUC-Osa-085368	Oryza sativa	43.13	2.00e-64	239.00
IUUC-Ola-086836	Oryzias latipes	81.35	0.00e+00	796.00
IUUC-Olu-087755	Ostreococcus lucimarinus	47.83	1.00e-127	449.00
IUUC-Oga-088170	Otolemur garnettii	75.06	0.00e+00	743.00
IUUC-Oar-089388	Ovis aries	74.83	0.00e+00	737.00
IUUC-Ptr-090494	Pan troglodytes	74.16	0.00e+00	736.00
IUUC-Pan-091697	Papio anubis	74.61	0.00e+00	741.00
IUUC-Psi-093916	Pelodiscus sinensis	72.58	0.00e+00	693.00
IUUC-Pno-095004	Phaeosphaeria nodorum	40.49	1.00e-98	353.00
IUUC-Ppa-095514	Physcomitrella patens	46.68	2.00e-129	456.00
IUUC-Pfo-097432	Poecilia formosa	80.14	0.00e+00	752.00
IUUC-Pab-098423	Pongo abelii	74.83	0.00e+00	741.00
IUUC-Pop-099649	Populus trichocarpa	47.12	1.00e-127	450.00
IUUC-Pca-100365	Procavia capensis	71.24	0.00e+00	668.00
IUUC-Ppe-101379	Prunus persica	46.24	4.00e-126	444.00
IUUC-Pva-102845	Pteropus vampyrus	73.93	0.00e+00	725.00
IUUC-Pgr-103469	Puccinia graminis	36.24	2.00e-80	293.00
IUUC-Ptt-103980	Puccinia triticina	33.26	2.00e-64	240.00
IUUC-Pte-104111	Pyrenophora teres	43.27	9.00e-107	380.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	43.27	9.00e-107	380.00
IUUC-Rno-105082	Rattus norvegicus	74.61	0.00e+00	737.00
IUUC-Sce-106340	Saccharomyces cerevisiae	45.94	4.00e-123	434.00
IUUC-Sha-106584	Sarcophilus harrisii	71.91	0.00e+00	721.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	43.95	4.00e-104	371.00
IUUC-Spo-108046	Schizosaccharomyces pombe	46.53	5.00e-112	397.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	44.35	6.00e-109	387.00
IUUC-Smo-109548	Selaginella moellendorffii	47.89	1.00e-128	453.00
IUUC-Sit-110242	Setaria italica	46.24	3.00e-119	421.00
IUUC-Sly-111762	Solanum lycopersicum	47.35	9.00e-125	440.00
IUUC-Stu-112156	Solanum tuberosum	46.68	4.00e-124	438.00
IUUC-Sbi-114739	Sorghum bicolor	46.90	5.00e-121	427.00
IUUC-Sre-114951	Sporisorium reilianum	39.51	1.00e-103	370.00
IUUC-Ssc-115510	Sus scrofa	73.71	0.00e+00	732.00
IUUC-Tgu-117234	Taeniopygia guttata	75.12	0.00e+00	657.00
IUUC-Tru-117986	Takifugu rubripes	80.18	0.00e+00	777.00
IUUC-Tsy-119252	Tarsius syrichta	71.03	0.00e+00	662.00
IUUC-Tni-119785	Tetraodon nigroviridis	80.91	0.00e+00	736.00
IUUC-Tca-121222	Theobroma cacao	46.92	1.00e-122	433.00
IUUC-Tre-122243	Trichoderma reesei	43.30	2.00e-105	376.00
IUUC-Tvi-122293	Trichoderma virens	42.67	5.00e-103	367.00
IUUC-Tae-125191	Triticum aestivum	44.91	1.00e-114	406.00
IUUC-Tur-126098	Triticum urartu	42.95	8.00e-105	374.00
IUUC-Tme-127200	Tuber melanosporum	45.96	1.00e-122	433.00
IUUC-Tbe-127568	Tupaia belangeri	73.45	7.00e-107	380.00
IUUC-Ttr-129185	Tursiops truncatus	65.84	0.00e+00	631.00
IUUC-Uma-129353	Ustilago maydis	40.04	2.00e-102	366.00
IUUC-Vda-129768	Verticillium dahliae	44.03	2.00e-103	369.00
IUUC-Vpa-130572	Vicugna pacos	74.16	0.00e+00	738.00
IUUC-Vvi-131555	Vitis vinifera	47.12	1.00e-125	443.00
IUUC-Xtr-132263	Xenopus tropicalis	77.20	0.00e+00	633.00
IUUC-Xma-133925	Xiphophorus maculatus	79.91	0.00e+00	751.00
IUUC-Yli-134384	Yarrowia lipolytica	45.43	7.00e-114	404.00
IUUC-Zma-135616	Zea mays	46.68	1.00e-119	423.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence