iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016727

Ensembl Protein ID

Bra007105.1-P

UniProt Accession

M4CSB3; M4CSB3_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra007105	Bra007105.1	Bra007105.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-32	112.5	248	320

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+f+CpIslelM+dPv++++G+ty+rssI+kwl+ g+ktcP+ +++l ++ l+Pn++l++li  wce+n++
   Q: 248  IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHSGLTPNYVLKSLIALWCESNGI 320
           8*********************************************************************987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGSTNGSDEE LMSRLVDSVK QISKFSNSKG FFGRIQGDLV RRITLLSPFF EELIDINAEL 60
NEEQQLTGFE VMRIALDSSL ELFRSVNGGS KLLQIVHRGS IMQKFHDVTV EIEAALTQIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGATCAA CGAATGGTTC CGATGAGGAG CTCATGAGTC GTCTCGTTGA CTCCGTCAAG 60
CAAATTTCAA AGTTCTCCAA TTCCAAAGGC TTCTTCGGGA GGATCCAAGG CGATCTCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002932	Amborella trichopoda	61.32	0.00e+00	696.00
IUUC-Aly-006103	Arabidopsis lyrata	88.49	0.00e+00	1082.00
IUUC-Ath-006994	Arabidopsis thaliana	87.56	0.00e+00	1072.00
IUUC-Bdi-014691	Brachypodium distachyon	61.40	0.00e+00	640.00
IUUC-Bol-016160	Brassica oleracea	98.58	0.00e+00	1197.00
IUUC-Gma-043496	Glycine max	65.29	0.00e+00	796.00
IUUC-Hvu-047272	Hordeum vulgare	61.89	0.00e+00	635.00
IUUC-Lpe-051517	Leersia perrieri	61.57	1.00e-179	622.00
IUUC-Mtr-057651	Medicago truncatula	63.96	0.00e+00	763.00
IUUC-Mac-065604	Musa acuminata	54.73	3.00e-169	588.00
IUUC-Oba-075750	Oryza barthii	61.01	0.00e+00	637.00
IUUC-Obr-076793	Oryza brachyantha	61.36	2.00e-176	611.00
IUUC-Ogl-077380	Oryza glaberrima	61.19	0.00e+00	637.00
IUUC-Ogu-078219	Oryza glumaepatula	60.63	0.00e+00	632.00
IUUC-Oin-079724	Oryza indica	56.62	0.00e+00	643.00
IUUC-Ome-081932	Oryza meridionalis	61.01	0.00e+00	635.00
IUUC-Oni-082439	Oryza nivara	61.38	0.00e+00	639.00
IUUC-Opu-083837	Oryza punctata	56.46	0.00e+00	640.00
IUUC-Oru-085172	Oryza rufipogon	61.19	0.00e+00	637.00
IUUC-Osa-085991	Oryza sativa	61.19	0.00e+00	637.00
IUUC-Pop-099229	Populus trichocarpa	67.89	0.00e+00	813.00
IUUC-Ppe-101965	Prunus persica	63.06	0.00e+00	763.00
IUUC-Sit-110461	Setaria italica	63.10	1.00e-175	609.00
IUUC-Sly-111662	Solanum lycopersicum	65.97	0.00e+00	781.00
IUUC-Stu-111979	Solanum tuberosum	65.81	0.00e+00	778.00
IUUC-Sbi-114550	Sorghum bicolor	57.43	0.00e+00	638.00
IUUC-Tca-121269	Theobroma cacao	67.78	0.00e+00	807.00
IUUC-Tae-124061	Triticum aestivum	61.40	0.00e+00	636.00
IUUC-Tur-126276	Triticum urartu	59.10	1.00e-170	592.00
IUUC-Vvi-131729	Vitis vinifera	65.40	0.00e+00	777.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence