iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099168

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Armadillo/beta-catenin repeat family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_816515; POPTR_0002s13790g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s04540	POPTR_0014s04540.1	POPTR_0014s04540.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	80.70	0.00e+00	1300.00	IUUC-Ath-006917

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNRRVRRKVA KKSKEKVGVP GNPEIGDADL CPDSNEDVDW TSLPDDTVIQ LFSCLNYRDR 60
ASLSSTCKIW RVLGLSSCLW TSLDLRAHKC DPGMAVSLAS RCVNLQKLRF RGAECADAII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTTATCC CCCCACAAAC CACAAAGACT CTCTCTTTCT CTCTCAAATT GCCTAATAAA 60
TAAAAAAAAG AAGAAAAGAG TAGAGGCATA CAAGCCTTCT TGAGGGCTTC CTTTCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR001810--F-box_dom
IPR032675--L_dom-like

PROSITE

PS50176--ARM_REPEAT
PS50181--FBOX

Pfam

PF00514--Arm
PF12937--F-box-like

SMART

SM00185--ARM
SM00256--FBOX

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus

KEGG

pop:POPTR_0002s13790g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000414	Aegilops tauschii	63.93	5.00e-170	590.00
IUUC-Atr-002711	Amborella trichopoda	72.48	0.00e+00	1189.00
IUUC-Aly-006252	Arabidopsis lyrata	79.66	0.00e+00	1353.00
IUUC-Ath-006917	Arabidopsis thaliana	78.60	0.00e+00	1342.00
IUUC-Bdi-014068	Brachypodium distachyon	69.83	0.00e+00	985.00
IUUC-Bol-015524	Brassica oleracea	77.87	0.00e+00	1308.00
IUUC-Bra-016626	Brassica rapa	77.98	0.00e+00	1332.00
IUUC-Dor-030505	Dipodomys ordii	20.85	8.00e-08	51.20
IUUC-Ete-032234	Echinops telfairi	27.22	3.00e-07	48.90
IUUC-Fca-035412	Felis catus	29.41	2.00e-12	66.20
IUUC-Gga-041152	Gallus gallus	29.44	6.00e-10	58.50
IUUC-Gma-042966	Glycine max	83.91	0.00e+00	1348.00
IUUC-Hvu-047326	Hordeum vulgare	69.75	0.00e+00	879.00
IUUC-Lch-050115	Latimeria chalumnae	26.53	1.00e-10	60.50
IUUC-Lpe-051066	Leersia perrieri	66.36	0.00e+00	928.00
IUUC-Mtr-057820	Medicago truncatula	82.30	0.00e+00	1267.00
IUUC-Mac-065669	Musa acuminata	74.15	0.00e+00	1170.00
IUUC-Oba-075240	Oryza barthii	72.35	0.00e+00	899.00
IUUC-Obr-076479	Oryza brachyantha	77.89	0.00e+00	736.00
IUUC-Ogl-077859	Oryza glaberrima	70.86	0.00e+00	1008.00
IUUC-Ogu-078740	Oryza glumaepatula	70.29	0.00e+00	902.00
IUUC-Oin-079442	Oryza indica	80.32	0.00e+00	749.00
IUUC-Olo-080928	Oryza longistaminata	66.08	0.00e+00	784.00
IUUC-Ome-081689	Oryza meridionalis	70.75	0.00e+00	1005.00
IUUC-Oni-083118	Oryza nivara	69.44	0.00e+00	998.00
IUUC-Opu-083603	Oryza punctata	69.26	0.00e+00	991.00
IUUC-Oru-085225	Oryza rufipogon	67.00	0.00e+00	991.00
IUUC-Osa-085817	Oryza sativa	78.74	0.00e+00	756.00
IUUC-Ppa-095537	Physcomitrella patens	65.12	0.00e+00	926.00
IUUC-Ppe-102089	Prunus persica	86.89	0.00e+00	1374.00
IUUC-Smo-109321	Selaginella moellendorffii	65.17	0.00e+00	1034.00
IUUC-Sit-110607	Setaria italica	67.93	0.00e+00	956.00
IUUC-Sly-111773	Solanum lycopersicum	78.90	0.00e+00	951.00
IUUC-Sbi-114140	Sorghum bicolor	68.52	0.00e+00	971.00
IUUC-Tca-121125	Theobroma cacao	88.38	0.00e+00	1397.00
IUUC-Tae-125154	Triticum aestivum	69.34	0.00e+00	985.00
IUUC-Tur-126716	Triticum urartu	70.00	0.00e+00	738.00
IUUC-Vvi-131526	Vitis vinifera	81.74	0.00e+00	1303.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence