iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-081066

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN540038.1_FG001	KN540038.1_FGT001	KN540038.1_FGP001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	32.9	162	204

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f+dg  +++lp C H+fh +C+  w       + + +CPlCr
   Q: 162  CSVCLGEFRDGesLRLLPkCSHAFHVQCIDTW------LKSHSNCPLCR 204
           ********7766699999**************......**********8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MASSPPTTPT LGSQPTWVPY EPTRDCSQGL CSMYCPQWCY FIFPPPPPAF DITGSGSDDS 60
SGPTFSPLVI AIIGVLASAF LLVSYYTIIS KYCGTFSSLR NRLLGSSAHR GGGGGGADGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCTT CTCCCCCTAC AACACCAACT CTCGGGTCTC AGCCTACATG GGTGCCCTAT 60
GAGCCAACCA GGGATTGCTC CCAGGGCCTC TGCAGCATGT ACTGCCCGCA GTGGTGCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002971	Amborella trichopoda	37.56	1.00e-61	229.00
IUUC-Aly-006095	Arabidopsis lyrata	43.05	6.00e-46	177.00
IUUC-Ath-006943	Arabidopsis thaliana	54.19	6.00e-42	163.00
IUUC-Bdi-014160	Brachypodium distachyon	66.67	2.00e-127	447.00
IUUC-Bol-015911	Brassica oleracea	51.10	5.00e-42	164.00
IUUC-Hvu-047701	Hordeum vulgare	71.94	1.00e-124	438.00
IUUC-Lpe-051459	Leersia perrieri	86.41	4.00e-164	570.00
IUUC-Mtr-058411	Medicago truncatula	42.57	6.00e-61	226.00
IUUC-Oba-075056	Oryza barthii	97.93	5.00e-172	595.00
IUUC-Obr-076483	Oryza brachyantha	80.81	7.00e-154	535.00
IUUC-Ogl-077644	Oryza glaberrima	97.93	4.00e-172	596.00
IUUC-Ogu-078989	Oryza glumaepatula	97.16	3.00e-171	593.00
IUUC-Oin-079716	Oryza indica	97.93	5.00e-172	595.00
IUUC-Ome-081279	Oryza meridionalis	96.55	1.00e-161	561.00
IUUC-Oni-082896	Oryza nivara	97.93	5.00e-172	595.00
IUUC-Opu-083796	Oryza punctata	98.11	3.00e-162	563.00
IUUC-Oru-084594	Oryza rufipogon	97.67	1.00e-171	595.00
IUUC-Osa-086004	Oryza sativa	97.67	1.00e-171	594.00
IUUC-Ppa-095182	Physcomitrella patens	45.56	3.00e-28	119.00
IUUC-Pfo-096517	Poecilia formosa	54.00	1.00e-13	69.70
IUUC-Pop-099246	Populus trichocarpa	41.42	2.00e-60	224.00
IUUC-Ppe-101720	Prunus persica	40.48	1.00e-63	235.00
IUUC-Smo-108989	Selaginella moellendorffii	42.36	7.00e-23	99.40
IUUC-Sit-109894	Setaria italica	76.68	6.00e-130	456.00
IUUC-Sly-110835	Solanum lycopersicum	40.16	1.00e-55	209.00
IUUC-Stu-112220	Solanum tuberosum	39.63	2.00e-58	218.00
IUUC-Sbi-114789	Sorghum bicolor	73.74	7.00e-139	486.00
IUUC-Tca-121189	Theobroma cacao	40.31	2.00e-66	245.00
IUUC-Tae-123315	Triticum aestivum	73.20	4.00e-126	443.00
IUUC-Uma-129481	Ustilago maydis	47.83	1.00e-10	62.80
IUUC-Vvi-130829	Vitis vinifera	41.34	5.00e-46	177.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence