iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135183

UUCD1 version

UUC-ZeM-00647

Ensembl Protein ID

Zm00001d052566_T001

UniProt Accession

A0A1D6QHT2; A0A1D6QHT2_MAIZE

Genbank Protein ID

AQK57429.1

Protein Name

ERAD-associated E3 ubiquitin-protein ligase HRD1A

Genbank Nucleotide ID

CM000780

Gene Name

ZEAMMB73_Zm00001d052566

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d052566	Zm00001d052566_T001	Zm00001d052566_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-07	31.9	292	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e++ +  + l CgH+fh +Cl  w        ++ +CP+Cr
   Q: 292  CIICREEMTT-AKKLLCGHLFHVHCLRSW------LERQHTCPTCR 330
           ********99.88999*************......**********8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MIRLPTYAAF SLLATASAAY YAFSSREQFY PAMVYLSTSK ICFVLLLNTG LVAMCVAWQL 60
ARRLFLGSLR EAEVERLNEQ SWREVIEILF AVTIFRQDFS VSFLAMVAAL LLVKALHWLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGCCCAGG CAAAACAGCC CCGGACCGCG TGCGTTTCGC TTCCGGCTTC CGCCCCTGCT 60
GTTTCTTGGC GTTCACCCCC TCTTTCTCTC GTGGCGACGA CGGCGACCGT CGCCGCCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002892	Amborella trichopoda	68.93	6.00e-159	553.00
IUUC-Apl-003404	Anas platyrhynchos	28.78	1.00e-38	154.00
IUUC-Aly-006352	Arabidopsis lyrata	69.04	3.00e-154	537.00
IUUC-Ath-006702	Arabidopsis thaliana	67.40	1.00e-155	541.00
IUUC-Ago-007894	Ashbya gossypii	41.05	6.00e-16	78.60
IUUC-Bol-015674	Brassica oleracea	66.67	1.00e-153	535.00
IUUC-Bra-017516	Brassica rapa	71.76	2.00e-148	518.00
IUUC-Cre-022743	Chlamydomonas reinhardtii	49.84	4.00e-94	337.00
IUUC-Fal-036758	Ficedula albicollis	29.46	2.00e-35	143.00
IUUC-Fox-037902	Fusarium oxysporum	47.18	7.00e-37	148.00
IUUC-Gga-040575	Gallus gallus	29.10	2.00e-41	163.00
IUUC-Gma-044123	Glycine max	71.96	4.00e-169	587.00
IUUC-Hvu-047279	Hordeum vulgare	88.97	0.00e+00	672.00
IUUC-Mtr-058601	Medicago truncatula	71.18	8.00e-172	596.00
IUUC-Mga-059937	Meleagris gallopavo	28.78	3.00e-39	155.00
IUUC-Olu-087894	Ostreococcus lucimarinus	48.25	3.00e-90	324.00
IUUC-Ppa-095684	Physcomitrella patens	68.50	4.00e-122	431.00
IUUC-Ppe-101829	Prunus persica	72.84	3.00e-171	594.00
IUUC-Ptt-103919	Puccinia triticina	36.30	4.00e-73	268.00
IUUC-Smo-109223	Selaginella moellendorffii	62.66	4.00e-130	457.00
IUUC-Stu-112048	Solanum tuberosum	67.49	2.00e-156	545.00
IUUC-Tgu-116717	Taeniopygia guttata	28.73	1.00e-38	154.00
IUUC-Tsy-118823	Tarsius syrichta	36.56	1.00e-51	196.00
IUUC-Tca-121462	Theobroma cacao	73.33	6.00e-173	600.00
IUUC-Tvi-122550	Trichoderma virens	42.25	2.00e-33	137.00
IUUC-Vpa-130483	Vicugna pacos	27.83	5.00e-32	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence