iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016424

Ensembl Protein ID

Bo9g013960.1

UniProt Accession

A0A0D3E1J3; A0A0D3E1J3_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo9g013960	Bo9g013960.1	Bo9g013960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-20	72.3	234	271

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt  v+ ++f +++++v+++ Dg +k+W++ +g++++
   Q: 234  GHTKTVSYVRFlDGGTVVTAGTDGCLKLWSVEDGRVIR 271
           8**********65599******************9887 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MNTHRTQKQE EEEARHEWDL SLSTVVSSSS SSASDVVGAI EFDPTDNILA TAGISRKIRF 60
YGLTSLLRTT AGVCGGAGGG VNFVDQTNAC EYYICTPAKL SSLRWKPGSC GRVIGSGDYD 120

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Nucleotide Sequence
(Fasta)

ATGAACACTC ATCGTACGCA AAAGCAGGAA GAAGAAGAAG CAAGACACGA ATGGGATCTT 60
TCTCTCTCCA CCGTCGTCTC TTCTTCCTCC TCTTCTGCCT CCGACGTTGT CGGAGCTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0009658--P:chloroplast organization
GO:0043496--P:regulation of protein homodimerization activity
GO:0010224--P:response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005431	Arabidopsis lyrata	87.98	8.00e-169	585.00
IUUC-Ath-006939	Arabidopsis thaliana	90.62	1.00e-160	558.00
IUUC-Bra-017360	Brassica rapa	97.98	1.00e-105	375.00
IUUC-Pop-099510	Populus trichocarpa	62.20	4.00e-111	394.00
IUUC-Ppe-102088	Prunus persica	63.96	8.00e-114	403.00
IUUC-Stu-112915	Solanum tuberosum	57.42	1.00e-111	396.00
IUUC-Tca-120952	Theobroma cacao	63.06	9.00e-121	426.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence