iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016672

Ensembl Protein ID

Bra029131.1-P

UniProt Accession

M4EK14; M4EK14_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra029131	Bra029131.1	Bra029131.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-26	92.3	212	243

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlr 31
           gHt  vt  +f + +++v+Gs Dg++k+WD+ 
   Q: 212  GHTKTVTYARFmDQHTIVTGSTDGSLKLWDIA 243
           8**********85589**************75 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDRDNNIPRF DWDLSFSTVV SSPSTGTDAI GAIEFDPSGE ILATGGIARK IRIYRLNSLL 60
GTSRDDDDDD HVERCICTPA KLSSLKWRPD LTGRVIGSGD YDGVVSEYDV EKGVPVFERD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACAGAG ACAACAACAT TCCTAGATTC GACTGGGATC TCTCCTTCTC CACCGTCGTG 60
TCCTCTCCTT CCACCGGAAC CGACGCTATC GGAGCCATCG AGTTCGACCC GAGTGGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043496--P:regulation of protein homodimerization activity
GO:0010218--P:response to far red light
GO:0010114--P:response to red light
GO:0010224--P:response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002851	Amborella trichopoda	46.52	5.00e-81	294.00
IUUC-Aly-005955	Arabidopsis lyrata	82.40	2.00e-147	514.00
IUUC-Ath-006872	Arabidopsis thaliana	83.43	5.00e-148	516.00
IUUC-Bdi-014616	Brachypodium distachyon	45.40	7.00e-63	234.00
IUUC-Bol-015816	Brassica oleracea	95.35	0.00e+00	630.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	39.22	8.00e-45	173.00
IUUC-Ogl-077687	Oryza glaberrima	44.89	1.00e-65	243.00
IUUC-Oin-079632	Oryza indica	44.35	2.00e-64	238.00
IUUC-Ome-081923	Oryza meridionalis	44.35	2.00e-61	229.00
IUUC-Oni-082448	Oryza nivara	44.92	2.00e-64	239.00
IUUC-Opu-083787	Oryza punctata	45.96	3.00e-78	285.00
IUUC-Oru-085278	Oryza rufipogon	44.35	2.00e-61	229.00
IUUC-Ppa-095874	Physcomitrella patens	38.62	4.00e-59	222.00
IUUC-Pop-099510	Populus trichocarpa	57.63	3.00e-109	388.00
IUUC-Ppe-102088	Prunus persica	58.54	4.00e-105	374.00
IUUC-Smo-109171	Selaginella moellendorffii	38.02	1.00e-63	236.00
IUUC-Sly-111536	Solanum lycopersicum	57.71	2.00e-112	398.00
IUUC-Stu-112915	Solanum tuberosum	56.75	3.00e-112	398.00
IUUC-Tca-120952	Theobroma cacao	58.54	2.00e-117	415.00
IUUC-Tae-123036	Triticum aestivum	48.84	1.00e-70	259.00
IUUC-Vvi-131711	Vitis vinifera	59.94	1.00e-108	387.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence