iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109171

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377605

Gene Name

SELMODRAFT_444188

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_444188	EFJ19649	EFJ19649

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-18	66.9	296	318

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   fsd.tllvsGsdDgtikvWDlrt 32
           f d  +lv++s D ti vWDl  
   Q: 296  FLDrERLVTASVDSTICVWDLAA 318
           546689**************965 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MVVAPGRPMQ LVVIVQLLMS NGQDAAAKRR CCVVRPPPRC PRRLEMEQGS SSRWAFRVRA 60
TIKPFASHAT ETIGSVAFDS SNELMATGGI ARKIRVYDIS AILDSEDKQQ QDQAADEDDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCAAAGT CATCCGGGGA TTCCAGGCTC TGGCACCGTG TCACGAGATG CAGCGGTAGA 60
TGGTAGTAGC ACCTGGAAGG CCGATGCAAC TGGTGGTGAT CGTCCAGTTG CTAATGTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_444188

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002851	Amborella trichopoda	32.86	1.00e-48	186.00
IUUC-Aly-005955	Arabidopsis lyrata	38.04	1.00e-55	209.00
IUUC-Ath-006872	Arabidopsis thaliana	38.59	3.00e-57	214.00
IUUC-Bol-015816	Brassica oleracea	38.46	7.00e-60	223.00
IUUC-Bra-016672	Brassica rapa	38.02	8.00e-65	239.00
IUUC-Ppa-095874	Physcomitrella patens	41.99	4.00e-72	265.00
IUUC-Pop-099510	Populus trichocarpa	35.03	1.00e-59	222.00
IUUC-Ppe-102088	Prunus persica	37.74	7.00e-63	233.00
IUUC-Sly-111536	Solanum lycopersicum	31.74	1.00e-59	223.00
IUUC-Tca-120952	Theobroma cacao	34.77	2.00e-59	222.00
IUUC-Tae-122908	Triticum aestivum	35.66	3.00e-47	181.00
IUUC-Vvi-131711	Vitis vinifera	35.26	1.00e-60	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence