iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099600

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTRDRAFT_251246; POPTR_0015s03560g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s03560	POPTR_0015s03560.1	POPTR_0015s03560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-06	30.2	281	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C++d+   ++ ++ lpC H +h +C+  w         + +CP+Cr
   Q: 281  CAVCKDDInvgER-VKQLPCLHRYHGECIVPW------LGIRNTCPVCR 322
           ********99777.******************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDLFQQRVEQ SQLLCDDDDV CSSLNESGFG VIQENSEYNL ELDLGLGFSL DSQDNSGFQN 60
IDANSNSNDN DVVYNVSNII VDDDDDFFIE RSVSGIESCQ AESTVSIRAN AIRVVGFGSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTACCACCC ATTTCAACAT CCACTCTCTG GCACACCAAG AAGACGACAC CGTTTCAGAT 60
CCTGAATCCG TTATCCTCAA CGGTCCCGAT CTCTTAGACC GCGAGAACCA GGTCAGTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0015s03560g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002504	Amborella trichopoda	53.85	3.00e-37	149.00
IUUC-Aly-005519	Arabidopsis lyrata	51.92	2.00e-43	169.00
IUUC-Ath-006756	Arabidopsis thaliana	47.20	4.00e-49	187.00
IUUC-Bol-016583	Brassica oleracea	36.04	2.00e-38	152.00
IUUC-Bra-017145	Brassica rapa	43.98	1.00e-37	149.00
IUUC-Gma-043673	Glycine max	52.42	3.00e-50	192.00
IUUC-Mtr-058184	Medicago truncatula	40.58	7.00e-60	224.00
IUUC-Mac-065058	Musa acuminata	41.91	8.00e-55	207.00
IUUC-Ogl-077383	Oryza glaberrima	37.18	3.00e-23	101.00
IUUC-Ppe-101286	Prunus persica	54.39	5.00e-74	271.00
IUUC-Sit-110141	Setaria italica	44.16	2.00e-33	136.00
IUUC-Sly-111587	Solanum lycopersicum	44.96	1.00e-65	243.00
IUUC-Stu-112460	Solanum tuberosum	45.11	2.00e-65	242.00
IUUC-Tca-121330	Theobroma cacao	51.63	3.00e-90	325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence