iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__1152__AT3G47990.1	fgenesh2_kg.5__1152__AT3G47990.1	fgenesh2_kg.5__1152__AT3G47990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-06	29.3	235	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f   ++++ lpC H fh +C+ +w       + + +CP Cr
   Q: 235  CLICLEEFhiGHEVRGLPCAHNFHVECIDQW------LRLNVKCPRCR 276
           ******9988666******************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAMRGVDFKW YDGFFLSMLA TSVIIVAVNW NRYRACEYPL HIWIVVDYTT VFLFRVFMFV 60
DNGLAAGLGL DFGSQQRNAM FCGRVVVLSV LSLLLYPFLW AWTVIGTQWF TRAKTCLPEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTAACTT CTTCCTCAGC CAGAAGTTTT CCGTTTCTTT TCTTCATCGC AATTTTGCAG 60
GCAGCTACTT TAGCCTCCAA ATCCCTCCTT TTTCTCTCCT TTCTCACTCA CAATCAGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0010182--P:sugar mediated signaling pathway

KEGG

aly:ARALYDRAFT_485160

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	80.27	1.00e-140	493.00
IUUC-Atr-002648	Amborella trichopoda	72.83	3.00e-146	510.00
IUUC-Ath-007655	Arabidopsis thaliana	98.04	0.00e+00	709.00
IUUC-Bdi-014759	Brachypodium distachyon	70.67	8.00e-129	452.00
IUUC-Bol-015136	Brassica oleracea	90.25	0.00e+00	649.00
IUUC-Bra-018024	Brassica rapa	85.79	3.00e-175	607.00
IUUC-Dme-031973	Drosophila melanogaster	48.21	5.00e-12	66.60
IUUC-Fox-037731	Fusarium oxysporum	51.92	1.00e-10	59.30
IUUC-Gma-042879	Glycine max	75.48	1.00e-159	555.00
IUUC-Hvu-047589	Hordeum vulgare	79.59	3.00e-63	233.00
IUUC-Lpe-051403	Leersia perrieri	64.14	2.00e-99	354.00
IUUC-Lma-053120	Leptosphaeria maculans	36.04	3.00e-11	63.50
IUUC-Mtr-058746	Medicago truncatula	75.96	2.00e-162	564.00
IUUC-Mac-064833	Musa acuminata	76.29	4.00e-152	530.00
IUUC-Oba-075099	Oryza barthii	78.40	2.00e-144	504.00
IUUC-Obr-076541	Oryza brachyantha	75.45	2.00e-144	504.00
IUUC-Ogl-077544	Oryza glaberrima	78.40	2.00e-144	504.00
IUUC-Ogu-078123	Oryza glumaepatula	73.77	1.00e-131	462.00
IUUC-Oin-079313	Oryza indica	77.39	9.00e-138	482.00
IUUC-Olo-080383	Oryza longistaminata	55.86	4.00e-92	330.00
IUUC-Ome-081106	Oryza meridionalis	67.11	4.00e-112	397.00
IUUC-Oni-082730	Oryza nivara	77.41	5.00e-147	513.00
IUUC-Opu-083224	Oryza punctata	73.43	1.00e-145	508.00
IUUC-Oru-085150	Oryza rufipogon	78.02	6.00e-118	416.00
IUUC-Osa-086306	Oryza sativa	78.09	2.00e-144	504.00
IUUC-Ppa-095217	Physcomitrella patens	46.96	3.00e-70	257.00
IUUC-Pop-099421	Populus trichocarpa	74.65	2.00e-146	511.00
IUUC-Ppe-101399	Prunus persica	72.53	2.00e-132	464.00
IUUC-Smo-109501	Selaginella moellendorffii	65.08	3.00e-111	393.00
IUUC-Sit-109685	Setaria italica	72.65	2.00e-145	508.00
IUUC-Sly-111730	Solanum lycopersicum	75.72	2.00e-155	540.00
IUUC-Stu-112358	Solanum tuberosum	73.31	2.00e-152	530.00
IUUC-Sbi-114646	Sorghum bicolor	72.83	4.00e-143	499.00
IUUC-Tni-119836	Tetraodon nigroviridis	42.65	1.00e-11	63.50
IUUC-Tca-121643	Theobroma cacao	77.18	1.00e-160	558.00
IUUC-Tae-123724	Triticum aestivum	74.33	6.00e-142	496.00
IUUC-Tur-126639	Triticum urartu	78.54	8.00e-113	400.00
IUUC-Vvi-131627	Vitis vinifera	67.88	6.00e-148	516.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence