iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006864

UUCD1 version

UUC-ArT-01572

Ensembl Protein ID

AT1G21780.1

UniProt Accession

Q9XHZ8; Q0WS66; Y1178_ARATH

Genbank Protein ID

AAD41432.1; AEE30155.1; AEE30156.1; ABD59057.1; BAF00033.1; AAM65090.1

Protein Name

BTB/POZ domain-containing protein At1g21780

Genbank Nucleotide ID

AC007727; CP002684; CP002684; BT024719; AK228073; AY087548

Gene Name

At1g21780; F8K7.22

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G21780	AT1G21780.1	AT1G21780.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/BCR/BTB_3-box	BTB_3-box	15772280

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_3-box: BTB	1.30e-15	58.4	161	222
E3 adaptor/Cullin RING/BCR/BTB_3-box: 3-box	9.50e-09	34.5	261	289

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_3-box: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmeleesksklmveikdvqpevfrallkFlYtg 63
           +Dvi++ ++   +ahk++L+asS vF+++f ++l e++ +++++i+d++ e++ all++lY +
   Q: 161  TDVIIHTADGTLSAHKAILSASSTVFKSMFHHDLMEKE-SSTIHIDDMSRESCMALLSYLYGN 222
           7***********************************98.**********************65 PP

E3 adaptor/Cullin RING/BCR/BTB_3-box: 3-box

   S: 1    leNclgilrfAdlydcpdLkdaaldfilk 29
           ++N+l++l+ A+ly++++Lk+ +l+++ +
   Q: 261  SSNVLERLQEAWLYQLEKLKKGCLMYLFD 289
           69************************976 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Homodimer. Interacts with CUL3A and CUL3B.

Protein Sequence
(Fasta)

MGDTKVETIS RLAQWRIENF GPCSFKKSDP FKVGIWNWHL SIERNRYLSV RLFPELSRVS 60
KEQPPVAKFV LRVSNVGPNR RFYISPVYEK LLRTTDDCVW HVDSSFHGRF TIDVEFLDLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGAGTGTT CAGAGGCGTG TTCGAAAGCG GCGACGCATA GATGCGAAGC TAAACCAAGT 60
CCTGCTTTTG ACGGCGGTAC GAAGGTTCGA ACCAGATCCA TGACTTTACC GTCATTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ

PROSITE

PS50097--BTB

Pfam

PF00651--BTB

SMART

SM00225--BTB

Gene Ontology

GO:0031463--C:Cul3-RING ubiquitin ligase complex
GO:0005737--C:cytoplasm
GO:0019005--C:SCF ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0030162--P:regulation of proteolysis

KEGG

ath:AT1G21780

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000268	Aegilops tauschii	58.31	4.00e-105	375.00
IUUC-Atr-002617	Amborella trichopoda	70.81	7.00e-139	486.00
IUUC-Aly-006048	Arabidopsis lyrata	98.47	0.00e+00	671.00
IUUC-Afu-008999	Aspergillus fumigatus	26.79	2.00e-06	45.40
IUUC-Bdi-014246	Brachypodium distachyon	67.38	2.00e-132	464.00
IUUC-Bol-015605	Brassica oleracea	95.71	0.00e+00	655.00
IUUC-Bra-016823	Brassica rapa	94.48	0.00e+00	647.00
IUUC-Cgl-026599	Colletotrichum gloeosporioides	25.47	4.00e-05	40.40
IUUC-Gma-043455	Glycine max	71.08	7.00e-142	495.00
IUUC-Hvu-047569	Hordeum vulgare	68.11	1.00e-132	465.00
IUUC-Lpe-051519	Leersia perrieri	64.00	2.00e-124	437.00
IUUC-Meu-056763	Macropus eugenii	30.66	4.00e-11	62.80
IUUC-Mtr-057832	Medicago truncatula	71.95	6.00e-146	509.00
IUUC-Mac-065579	Musa acuminata	71.83	7.00e-144	502.00
IUUC-Oba-075166	Oryza barthii	64.00	3.00e-127	447.00
IUUC-Obr-076912	Oryza brachyantha	65.85	2.00e-129	454.00
IUUC-Ogu-078355	Oryza glumaepatula	61.23	9.00e-120	422.00
IUUC-Oin-079599	Oryza indica	64.42	6.00e-127	446.00
IUUC-Olo-080342	Oryza longistaminata	52.76	3.00e-90	324.00
IUUC-Ome-081792	Oryza meridionalis	60.00	3.00e-114	404.00
IUUC-Oni-082098	Oryza nivara	63.69	4.00e-126	443.00
IUUC-Opu-083754	Oryza punctata	62.92	3.00e-122	430.00
IUUC-Oru-085273	Oryza rufipogon	64.00	4.00e-127	446.00
IUUC-Osa-085775	Oryza sativa	63.79	2.00e-108	385.00
IUUC-Ppa-095968	Physcomitrella patens	52.24	2.00e-59	222.00
IUUC-Pop-099811	Populus trichocarpa	77.68	3.00e-156	543.00
IUUC-Ppe-101447	Prunus persica	79.75	4.00e-160	556.00
IUUC-Smo-108826	Selaginella moellendorffii	48.60	2.00e-81	295.00
IUUC-Sit-110776	Setaria italica	67.18	1.00e-131	461.00
IUUC-Sly-111250	Solanum lycopersicum	75.00	6.00e-149	519.00
IUUC-Stu-112537	Solanum tuberosum	74.70	5.00e-148	516.00
IUUC-Sbi-113919	Sorghum bicolor	68.52	9.00e-134	468.00
IUUC-Tca-121276	Theobroma cacao	77.61	2.00e-155	540.00
IUUC-Tae-123929	Triticum aestivum	67.80	2.00e-132	464.00
IUUC-Tur-126374	Triticum urartu	57.10	1.00e-101	362.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence