iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057791

Ensembl Protein ID

KEH35760

UniProt Accession

I3T3Z8; I3T3Z8_MEDTR

Genbank Protein ID

AFK47240.1; KEH35760.1

Protein Name

F-box GID2-like protein

Genbank Nucleotide ID

BT147446; CM001219

Gene Name

MTR_3g102470

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g102470	KEH35760	KEH35760

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	55.80	2.00e-47	184.00	IUUC-Ath-007482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MKRSLSSEAN EDRKMKRVKE EESEKIDGVC EKNRGLASFD ENMLFEVLKH VDARTLAMSS 60
CVNKQWHKTA QDERLWELIC TKQWANTGCG EQQLRSVVLA LGGFRRLHSL YLLPLSKPQT 120

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Nucleotide Sequence
(Fasta)

AAAAAAAAGA ATCGAAACGC ATTTATTTCA CTCTTTGTCG TCTTCGTAAA TCATCAAAAA 60
CAGGTGCACC CCCCTAACCT TAACCTTTAC TTCACCTGCC CCATTCTCTA TCCTTTCCTC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF00646--F-box

Gene Ontology

GO:0005634--C:nucleus
GO:0019005--C:SCF ubiquitin ligase complex
GO:0010162--P:seed dormancy process
GO:0009845--P:seed germination

KEGG

mtr:MTR_3g102470

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002597	Amborella trichopoda	66.91	2.00e-36	144.00
IUUC-Apl-003324	Anas platyrhynchos	33.33	2.00e-03	36.20
IUUC-Aly-006435	Arabidopsis lyrata	58.64	2.00e-48	183.00
IUUC-Ath-007482	Arabidopsis thaliana	55.80	9.00e-49	184.00
IUUC-Bdi-014906	Brachypodium distachyon	43.18	1.00e-28	118.00
IUUC-Bol-016273	Brassica oleracea	56.25	6.00e-44	168.00
IUUC-Bra-016627	Brassica rapa	56.25	5.00e-44	169.00
IUUC-Gmo-039360	Gadus morhua	32.65	2.00e-04	39.30
IUUC-Gac-041737	Gasterosteus aculeatus	34.69	1.00e-04	40.00
IUUC-Gma-043301	Glycine max	74.30	2.00e-65	240.00
IUUC-Hvu-047070	Hordeum vulgare	43.31	5.00e-24	103.00
IUUC-Mac-064781	Musa acuminata	53.38	7.00e-32	129.00
IUUC-Ont-071234	Oreochromis niloticus	32.65	5.00e-04	38.10
IUUC-Obr-076578	Oryza brachyantha	44.36	5.00e-31	127.00
IUUC-Ogl-077389	Oryza glaberrima	45.67	2.00e-20	91.30
IUUC-Oin-079212	Oryza indica	45.67	2.00e-20	91.30
IUUC-Pfo-097122	Poecilia formosa	33.96	2.00e-04	39.70
IUUC-Pop-098990	Populus trichocarpa	61.67	4.00e-56	209.00
IUUC-Ppe-102068	Prunus persica	67.86	2.00e-46	177.00
IUUC-Smo-108701	Selaginella moellendorffii	45.04	1.00e-21	95.10
IUUC-Sit-110635	Setaria italica	50.00	3.00e-21	94.40
IUUC-Sly-111686	Solanum lycopersicum	54.17	2.00e-24	104.00
IUUC-Stu-111934	Solanum tuberosum	54.88	3.00e-24	104.00
IUUC-Sbi-113872	Sorghum bicolor	53.25	5.00e-18	84.00
IUUC-Tca-121336	Theobroma cacao	65.71	6.00e-59	218.00
IUUC-Vvi-131285	Vitis vinifera	57.38	3.00e-45	173.00
IUUC-Xma-133836	Xiphophorus maculatus	33.96	2.00e-04	39.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence