iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114504

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G520400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g048530	Sb01g048530.1	Sb01g048530.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-09	39.5	102	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f  +++++vlp CgH+fh  C+  w         + +CP Cr
   Q: 102  CAICLSEFapREEVRVLPqCGHAFHVACIDTW------LAAHSSCPSCR 144
           ********99666*******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MASPARRLLQ TNSAQYPTLP AAEAPSPLAV DSDVVVILAA LLCALICVVG LAAVARCARS 60
RAGAPSAAQA AARRGLKKKA LRALPSLAYE DAVAEAKVLT ECAICLSEFA PREEVRVLPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCGC CAGCGCGGCG GCTCCTGCAG ACCAACTCCG CGCAGTACCC GACGCTCCCC 60
GCGGCCGAGG CGCCGAGCCC GCTGGCCGTC GACTCCGACG TGGTCGTCAT CCTCGCGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g048530

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000485	Aegilops tauschii	73.61	9.00e-25	104.00
IUUC-Bol-016328	Brassica oleracea	57.45	2.00e-27	114.00
IUUC-Bra-016980	Brassica rapa	59.49	2.00e-22	97.80
IUUC-Gma-043769	Glycine max	56.84	4.00e-26	110.00
IUUC-Hvu-047500	Hordeum vulgare	66.99	3.00e-27	112.00
IUUC-Mtr-057800	Medicago truncatula	58.87	7.00e-29	119.00
IUUC-Mac-064619	Musa acuminata	64.52	3.00e-30	123.00
IUUC-Pop-099472	Populus trichocarpa	52.60	9.00e-25	105.00
IUUC-Ppe-101319	Prunus persica	51.46	1.00e-35	141.00
IUUC-Tae-124720	Triticum aestivum	63.30	2.00e-28	118.00
IUUC-Vvi-131309	Vitis vinifera	52.00	7.00e-27	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence