iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109093

Ensembl Protein ID

EFJ32187

UniProt Accession

D8R5N8; D8R5N8_SELML

Genbank Protein ID

EFJ32187.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377572

Gene Name

SELMODRAFT_407455

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_407455	EFJ32187	EFJ32187

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-41	137.0	198	236
UBD/Beta-Prp	7.10e-64	216.5	71	297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++sv c +f +d +l+++Gs D++++vW++r+g +++
   Q: 198  GHSGSVICGCFtPDgKLVCTGSSDCSLRVWNPRSGECIR 236
           899*999988**99899999****************986 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
            g h++ +++v++   ++s++atg+ d++i +w++ +  +  +l++h++ ++++ fs dgk+l++g+ D++++vwd   g+  h l+g  ++++ l ++p 
   Q: 71   TG-HTESVYAVACsPVESSVVATGGGDDKIFIWKIGDDAAPLELKEHKDSISSLAFSFDGKLLASGGLDGVVCVWDG-VGSLKHRLEGPGEDIVWLCWHPR 169
           44.55555556662668899********************************************************7.58899****************** PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltg..ghtdsvyslsfdsngkelvsgsldgtv 204
           g+ l++Gs+d  + +w+ ++g cl+ +++gh+g+v c ++ pdg+l+ +Gs D  +r+W+ ++g+++r  +g  +h + v+++++++++   ++gs dg+v
   Q: 170  GHILLAGSQDFSVWMWNADSGACLS-VFTGHSGSVICGCFTPDGKLVCTGSSDCSLRVWNPRSGECIRNIQGhpYHRGGVTCVAVSRDSSIALTGSADGSV 269
           *************************.********************************************653379************************* PP
   S: 205  klwdlqtgecvrtlnghtdnvksvrfsp 232
            l+++q+g+++ tl ght+ +  +++sp
   Q: 270  CLVNIQSGRVLGTLSGHTQAIEAIALSP 297
           *********************9999885 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAIQQNVAQQ ASGGDGDGDS PVFIDQADVD GEVLIDEQDL PDAEEDGDGE DEEEKEEEEE 60
DGNDDSIHIF TGHTESVYAV ACSPVESSVV ATGGGDDKIF IWKIGDDAAP LELKEHKDSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATCC AGCAGGTAAG ATGTGCGTGG GTTTTGTTGA TAAAGAATGT GGCGCAGCAG 60
GCAAGCGGTG GCGATGGCGA TGGCGATTCT CCGGTGTTCA TCGACCAAGC TGATGTTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_407455

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014831	Brachypodium distachyon	46.78	2.00e-90	325.00
IUUC-Ete-033100	Echinops telfairi	36.92	3.00e-37	148.00
IUUC-Gmo-039090	Gadus morhua	34.31	2.00e-40	159.00
IUUC-Gma-044168	Glycine max	50.14	4.00e-98	350.00
IUUC-Hvu-047217	Hordeum vulgare	45.91	4.00e-88	317.00
IUUC-Kpa-049147	Komagataella pastoris	29.04	1.00e-26	113.00
IUUC-Lch-049747	Latimeria chalumnae	33.00	2.00e-48	185.00
IUUC-Lpe-051433	Leersia perrieri	45.95	2.00e-85	308.00
IUUC-Mtr-057759	Medicago truncatula	47.95	4.00e-88	317.00
IUUC-Mvi-060237	Microbotryum violaceum	32.96	7.00e-54	204.00
IUUC-Mac-065236	Musa acuminata	52.27	1.00e-101	362.00
IUUC-Ont-072614	Oreochromis niloticus	35.29	7.00e-57	213.00
IUUC-Oba-075195	Oryza barthii	48.33	2.00e-90	325.00
IUUC-Obr-076059	Oryza brachyantha	47.80	2.00e-92	331.00
IUUC-Ogl-077318	Oryza glaberrima	47.80	3.00e-93	334.00
IUUC-Ogu-078579	Oryza glumaepatula	47.59	1.00e-90	326.00
IUUC-Oin-079340	Oryza indica	47.80	3.00e-93	334.00
IUUC-Olo-080813	Oryza longistaminata	48.19	4.00e-91	327.00
IUUC-Ome-081420	Oryza meridionalis	48.94	3.00e-91	327.00
IUUC-Oni-082650	Oryza nivara	48.33	2.00e-90	325.00
IUUC-Opu-083832	Oryza punctata	48.02	6.00e-89	320.00
IUUC-Oru-084207	Oryza rufipogon	48.33	2.00e-90	325.00
IUUC-Osa-085708	Oryza sativa	47.80	3.00e-93	334.00
IUUC-Pop-099140	Populus trichocarpa	56.01	7.00e-106	376.00
IUUC-Ppe-101979	Prunus persica	52.31	4.00e-102	363.00
IUUC-Sit-109978	Setaria italica	48.39	2.00e-94	338.00
IUUC-Sly-111316	Solanum lycopersicum	52.91	1.00e-101	362.00
IUUC-Stu-111956	Solanum tuberosum	52.91	2.00e-102	365.00
IUUC-Sbi-114189	Sorghum bicolor	48.09	1.00e-88	319.00
IUUC-Tru-117851	Takifugu rubripes	33.43	2.00e-54	205.00
IUUC-Tni-120248	Tetraodon nigroviridis	35.80	2.00e-57	215.00
IUUC-Tca-121686	Theobroma cacao	49.57	6.00e-96	343.00
IUUC-Tae-125689	Triticum aestivum	46.78	2.00e-89	322.00
IUUC-Vvi-131319	Vitis vinifera	52.31	4.00e-107	380.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence