iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016825

Ensembl Protein ID

Bra024559.1-P

UniProt Accession

M4E704; M4E704_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra024559	Bra024559.1	Bra024559.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-31	109.2	238	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p +flCp+slelM+dPv++++G+ty+r++I++w++ g+ tcP+t+q+l++ +l+Pn++lr+li++wc+e+++
   Q: 238  IPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNI 310
           899*******************************************************************986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAGVNVSPAS LLELIAEIAE IPINAGVFKK DCADLTRRVC LLTHLVEEIR DSNPVDSAAA 60
SSSENDWWSD LVVGLQAAKR LLSSATRFQA RDSSDGAVKR ISFQLQCITW RLEKALSNLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGGAG TAAACGTCTC ACCCGCCTCT CTGCTCGAGC TTATAGCCGA GATTGCCGAG 60
ATTCCAATCA ACGCCGGCGT GTTCAAGAAG GACTGCGCGG ATCTCACTCG GCGAGTCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005917	Arabidopsis lyrata	89.74	0.00e+00	1082.00
IUUC-Ath-006760	Arabidopsis thaliana	89.92	0.00e+00	1085.00
IUUC-Bol-015936	Brassica oleracea	98.36	0.00e+00	1190.00
IUUC-Cel-018336	Caenorhabditis elegans	38.89	3.00e-09	57.80
IUUC-Gma-043730	Glycine max	62.87	0.00e+00	703.00
IUUC-Hvu-047676	Hordeum vulgare	64.76	3.00e-126	444.00
IUUC-Lpe-051513	Leersia perrieri	51.22	8.00e-159	553.00
IUUC-Mtr-058156	Medicago truncatula	59.63	0.00e+00	684.00
IUUC-Oba-075045	Oryza barthii	50.41	6.00e-157	547.00
IUUC-Obr-076820	Oryza brachyantha	63.41	4.00e-143	500.00
IUUC-Ogl-077779	Oryza glaberrima	50.90	3.00e-160	558.00
IUUC-Ogu-078572	Oryza glumaepatula	50.90	3.00e-160	558.00
IUUC-Oin-079487	Oryza indica	50.73	9.00e-160	556.00
IUUC-Olo-080348	Oryza longistaminata	53.14	8.00e-154	536.00
IUUC-Ome-081282	Oryza meridionalis	51.06	7.00e-160	556.00
IUUC-Oni-083061	Oryza nivara	50.73	9.00e-160	556.00
IUUC-Opu-083297	Oryza punctata	50.16	7.00e-150	523.00
IUUC-Oru-084442	Oryza rufipogon	50.90	3.00e-160	558.00
IUUC-Osa-085919	Oryza sativa	50.90	3.00e-160	558.00
IUUC-Pop-099907	Populus trichocarpa	60.60	0.00e+00	717.00
IUUC-Ppe-101146	Prunus persica	58.97	0.00e+00	668.00
IUUC-Sly-111534	Solanum lycopersicum	59.48	0.00e+00	638.00
IUUC-Stu-112138	Solanum tuberosum	60.94	0.00e+00	652.00
IUUC-Sbi-114533	Sorghum bicolor	52.88	4.00e-154	538.00
IUUC-Tca-121496	Theobroma cacao	65.02	0.00e+00	755.00
IUUC-Tae-125409	Triticum aestivum	53.64	3.00e-141	494.00
IUUC-Tur-126634	Triticum urartu	52.71	2.00e-136	479.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence