iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aca-005241

Ensembl Protein ID

ENSACAP00000012144.3

UniProt Accession

H9GIU1; H9GIU1_ANOCA

Protein Name

Uncharacterized protein

Gene Name

LDB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSACAG00000012317.3	ENSACAT00000012389.3	ENSACAP00000012144.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	63.56	4.00e-127	451.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Anolis carolinensis

Protein Sequence
(Fasta)

MSVGCACPGC SSKSFKLYSP KEPPNGNAFP PFHPGTMLDR DVGPTPMYPP TYLEPGIGRH 60
TPYGNQTDYR IFELNKRLQN WTEECDNLWW DAFTTEFFED DAMLTITFCL EDGPKRYTIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAGAGCGG GGTGTTTTTC CCTGCCTGCG TCACACGGCT GTCCCTCCCT CTGCCTCCCC 60
TCTTCCCTCC TCCTCGGCTC AGGTCACTTT GACAAGCTCG CGCGCTCGCT CTCCTCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0000790--C:nuclear chromatin
GO:0005667--C:transcription factor complex
GO:0003682--F:chromatin binding
GO:0001158--F:enhancer sequence-specific DNA binding
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0009948--P:anterior/posterior axis specification
GO:0022607--P:cellular component assembly
GO:0021702--P:cerebellar Purkinje cell differentiation
GO:0010669--P:epithelial structure maintenance
GO:0001702--P:gastrulation with mouth forming second
GO:0043973--P:histone H3-K4 acetylation
GO:0045647--P:negative regulation of erythrocyte differentiation
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0045785--P:positive regulation of cell adhesion
GO:0046985--P:positive regulation of hemoglobin biosynthetic process
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0032784--P:regulation of DNA-templated transcription, elongation
GO:0051893--P:regulation of focal adhesion assembly
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance
GO:0006366--P:transcription from RNA polymerase II promoter
GO:0000972--P:transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0016055--P:Wnt signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	25.30	2.00e-04	41.20
IUUC-Aml-002031	Ailuropoda melanoleuca	98.06	0.00e+00	757.00
IUUC-Atr-003083	Amborella trichopoda	22.06	6.00e-04	40.00
IUUC-Apl-004210	Anas platyrhynchos	98.48	2.00e-179	620.00
IUUC-Aly-006204	Arabidopsis lyrata	25.00	3.00e-06	47.40
IUUC-Ath-007339	Arabidopsis thaliana	25.00	3.00e-06	47.80
IUUC-Acl-008255	Aspergillus clavatus	20.18	1.00e-05	45.40
IUUC-Ame-010910	Astyanax mexicanus	95.63	0.00e+00	741.00
IUUC-Bgr-012180	Blumeria graminis	22.17	1.00e-05	45.10
IUUC-Bta-012596	Bos taurus	74.51	2.00e-155	541.00
IUUC-Bci-013927	Botrytis cinerea	24.66	2.00e-06	47.40
IUUC-Bol-015721	Brassica oleracea	25.53	6.00e-07	49.70
IUUC-Bra-017183	Brassica rapa	25.53	6.00e-07	49.70
IUUC-Cel-018189	Caenorhabditis elegans	33.62	1.00e-30	127.00
IUUC-Cja-019586	Callithrix jacchus	76.84	4.00e-161	560.00
IUUC-Cfa-021188	Canis familiaris	98.06	0.00e+00	756.00
IUUC-Cpo-022350	Cavia porcellus	98.51	0.00e+00	744.00
IUUC-Csa-023816	Chlorocebus sabaeus	98.78	0.00e+00	768.00
IUUC-Cho-024958	Choloepus hoffmanni	61.78	3.00e-65	241.00
IUUC-Cin-025721	Ciona intestinalis	51.44	6.00e-88	317.00
IUUC-Csv-026065	Ciona savignyi	52.08	3.00e-92	331.00
IUUC-Dre-027356	Danio rerio	70.59	7.00e-152	530.00
IUUC-Dno-029918	Dasypus novemcinctus	98.44	0.00e+00	738.00
IUUC-Dor-030634	Dipodomys ordii	98.93	0.00e+00	694.00
IUUC-Dse-031245	Dothistroma septosporum	24.00	1.00e-04	42.00
IUUC-Dme-031667	Drosophila melanogaster	63.37	5.00e-125	441.00
IUUC-Ete-032246	Echinops telfairi	73.95	1.00e-155	542.00
IUUC-Eca-034015	Equus caballus	75.98	7.00e-161	559.00
IUUC-Eeu-034902	Erinaceus europaeus	98.93	0.00e+00	694.00
IUUC-Fca-035903	Felis catus	98.52	0.00e+00	748.00
IUUC-Fal-037407	Ficedula albicollis	77.87	2.00e-154	538.00
IUUC-Gmo-039466	Gadus morhua	92.52	0.00e+00	753.00
IUUC-Ggr-040030	Gaeumannomyces graminis	25.93	4.00e-03	37.00
IUUC-Gga-040214	Gallus gallus	99.51	0.00e+00	768.00
IUUC-Gac-042214	Gasterosteus aculeatus	91.87	0.00e+00	754.00
IUUC-Gma-042794	Glycine max	24.53	5.00e-07	50.10
IUUC-Ggo-044988	Gorilla gorilla	75.98	7.00e-162	562.00
IUUC-Hsa-046092	Homo sapiens	75.70	2.00e-158	551.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	99.03	0.00e+00	770.00
IUUC-Lch-049895	Latimeria chalumnae	81.85	3.00e-100	357.00
IUUC-Lpe-050806	Leersia perrieri	25.35	4.00e-06	47.00
IUUC-Loc-052845	Lepisosteus oculatus	97.32	0.00e+00	771.00
IUUC-Lma-053090	Leptosphaeria maculans	23.62	1.00e-04	41.60
IUUC-Laf-054538	Loxodonta africana	95.91	0.00e+00	642.00
IUUC-Mcc-055116	Macaca mulatta	71.48	2.00e-120	424.00
IUUC-Meu-056777	Macropus eugenii	93.33	0.00e+00	637.00
IUUC-Mpo-057376	Magnaporthe poae	21.47	1.00e-03	38.90
IUUC-Mtr-058142	Medicago truncatula	24.53	6.00e-07	49.70
IUUC-Mga-059716	Meleagris gallopavo	77.31	1.00e-153	535.00
IUUC-Mmr-060649	Microcebus murinus	75.70	2.00e-160	557.00
IUUC-Mdo-062535	Monodelphis domestica	76.26	2.00e-158	551.00
IUUC-Mmu-064036	Mus musculus	74.86	2.00e-158	551.00
IUUC-Mac-065338	Musa acuminata	23.67	1.00e-05	45.40
IUUC-Mpu-065719	Mustela putorius furo	99.03	0.00e+00	770.00
IUUC-Mlu-067219	Myotis lucifugus	97.29	0.00e+00	736.00
IUUC-Ncr-068691	Neurospora crassa	22.08	1.00e-04	42.00
IUUC-Nle-068983	Nomascus leucogenys	76.84	1.00e-161	561.00
IUUC-Opr-070467	Ochotona princeps	98.93	0.00e+00	694.00
IUUC-Ont-071566	Oreochromis niloticus	94.09	0.00e+00	763.00
IUUC-Oan-073368	Ornithorhynchus anatinus	98.40	0.00e+00	686.00
IUUC-Ocu-074854	Oryctolagus cuniculus	75.70	5.00e-162	563.00
IUUC-Ome-081687	Oryza meridionalis	26.32	1.00e-03	38.10
IUUC-Ola-086364	Oryzias latipes	94.10	0.00e+00	760.00
IUUC-Oga-088235	Otolemur garnettii	74.86	2.00e-157	548.00
IUUC-Oar-089547	Ovis aries	98.06	0.00e+00	757.00
IUUC-Ptr-091423	Pan troglodytes	76.26	3.00e-161	560.00
IUUC-Pan-092378	Papio anubis	98.67	0.00e+00	692.00
IUUC-Psi-093638	Pelodiscus sinensis	76.26	1.00e-155	541.00
IUUC-Pma-094384	Petromyzon marinus	65.36	2.00e-50	191.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.66	2.00e-04	40.80
IUUC-Pfo-096031	Poecilia formosa	92.00	0.00e+00	702.00
IUUC-Pab-097886	Pongo abelii	76.84	1.00e-161	561.00
IUUC-Pop-099430	Populus trichocarpa	24.85	3.00e-06	47.80
IUUC-Pca-101138	Procavia capensis	98.93	0.00e+00	694.00
IUUC-Ppe-101293	Prunus persica	29.67	1.00e-06	48.10
IUUC-Pva-103215	Pteropus vampyrus	75.98	1.00e-161	561.00
IUUC-Pte-104238	Pyrenophora teres	24.41	4.00e-04	39.30
IUUC-Rno-105968	Rattus norvegicus	75.14	1.00e-158	551.00
IUUC-Sha-107595	Sarcophilus harrisii	98.24	0.00e+00	727.00
IUUC-Ssl-108527	Sclerotinia sclerotiorum	23.45	1.00e-05	44.70
IUUC-Smo-109552	Selaginella moellendorffii	19.34	6.00e-04	39.70
IUUC-Sly-110873	Solanum lycopersicum	25.47	4.00e-06	47.00
IUUC-Stu-112586	Solanum tuberosum	20.00	5.00e-03	36.60
IUUC-Sar-113076	Sorex araneus	73.82	8.00e-104	370.00
IUUC-Sre-115143	Sporisorium reilianum	18.93	8.00e-04	39.30
IUUC-Ssc-115755	Sus scrofa	98.40	0.00e+00	685.00
IUUC-Tgu-117326	Taeniopygia guttata	77.59	7.00e-154	536.00
IUUC-Tru-117858	Takifugu rubripes	73.73	1.00e-159	555.00
IUUC-Tsy-119296	Tarsius syrichta	69.55	1.00e-141	496.00
IUUC-Tni-119822	Tetraodon nigroviridis	90.11	0.00e+00	640.00
IUUC-Tca-120935	Theobroma cacao	29.67	7.00e-07	49.70
IUUC-Tbe-127366	Tupaia belangeri	97.33	0.00e+00	669.00
IUUC-Ttr-128484	Tursiops truncatus	75.99	6.00e-150	523.00
IUUC-Vpa-130304	Vicugna pacos	73.40	5.00e-120	423.00
IUUC-Vvi-131560	Vitis vinifera	28.57	3.00e-06	47.40
IUUC-Xtr-132062	Xenopus tropicalis	98.93	0.00e+00	688.00
IUUC-Xma-134288	Xiphophorus maculatus	94.66	0.00e+00	774.00
IUUC-Yli-134374	Yarrowia lipolytica	20.00	1.00e-05	44.70
IUUC-Zma-135310	Zea mays	23.16	2.00e-04	41.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence