iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	15694383

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MQCDIQTSRR ECPIEPTTGM NRRGLNAGNT MTSQANIDDG SWKAVSEGGS MLPASNSAVL 60
NPDGSNQSGF AQGGLPYNSA GNPYPPAGQS SPAGNQSIVF QNSNQPGSNT PQYTSSPAPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTGCTATT TGGAAAGCGA TGGCAAAACT ATCGGTGGAG GCCAATCAGT TTTCTTAAAT 60
TGTAGATACA TTTATATGTG TTTGTGCTTT AAGAATTAAA ATATTGTATG CCTTTTGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0005634--C:nucleus
GO:0001085--F:RNA polymerase II transcription factor binding
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0008134--F:transcription factor binding
GO:0007411--P:axon guidance
GO:0007350--P:blastoderm segmentation
GO:0022416--P:chaeta development
GO:0008407--P:chaeta morphogenesis
GO:0048749--P:compound eye development
GO:0070983--P:dendrite guidance
GO:0007476--P:imaginal disc-derived wing morphogenesis
GO:0007399--P:nervous system development
GO:0006909--P:phagocytosis
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0007563--P:regulation of eclosion
GO:0010468--P:regulation of gene expression
GO:0008593--P:regulation of Notch signaling pathway
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	20.81	3.00e-03	37.00
IUUC-Aml-002031	Ailuropoda melanoleuca	64.14	2.00e-128	451.00
IUUC-Atr-003083	Amborella trichopoda	17.33	1.00e-04	41.60
IUUC-Apl-004210	Anas platyrhynchos	72.50	3.00e-108	384.00
IUUC-Aca-005241	Anolis carolinensis	63.56	2.00e-128	451.00
IUUC-Aly-006204	Arabidopsis lyrata	24.12	9.00e-07	48.50
IUUC-Ath-007339	Arabidopsis thaliana	24.12	9.00e-07	48.50
IUUC-Acl-008255	Aspergillus clavatus	17.87	1.00e-04	41.20
IUUC-Afl-008469	Aspergillus flavus	18.05	2.00e-04	40.40
IUUC-Afu-009010	Aspergillus fumigatus	19.57	9.00e-05	41.60
IUUC-Aor-010071	Aspergillus oryzae	18.05	1.00e-04	40.80
IUUC-Ate-010596	Aspergillus terreus	24.64	8.00e-09	55.10
IUUC-Ame-010910	Astyanax mexicanus	60.05	7.00e-121	426.00
IUUC-Bgr-012180	Blumeria graminis	20.31	1.00e-06	47.80
IUUC-Bta-012596	Bos taurus	63.61	3.00e-125	440.00
IUUC-Bci-013927	Botrytis cinerea	20.69	3.00e-04	39.70
IUUC-Bol-015721	Brassica oleracea	24.12	7.00e-07	48.50
IUUC-Bra-017183	Brassica rapa	24.12	7.00e-07	48.50
IUUC-Cel-018189	Caenorhabditis elegans	31.42	7.00e-26	111.00
IUUC-Cja-019586	Callithrix jacchus	63.34	4.00e-125	439.00
IUUC-Cfa-021188	Canis familiaris	57.46	2.00e-128	451.00
IUUC-Cpo-022350	Cavia porcellus	62.57	4.00e-127	446.00
IUUC-Csa-023816	Chlorocebus sabaeus	62.39	9.00e-126	442.00
IUUC-Cho-024958	Choloepus hoffmanni	55.56	1.00e-62	233.00
IUUC-Cin-025721	Ciona intestinalis	47.59	8.00e-81	293.00
IUUC-Csv-026065	Ciona savignyi	50.16	8.00e-86	309.00
IUUC-Dre-027356	Danio rerio	63.28	1.00e-125	442.00
IUUC-Dno-029918	Dasypus novemcinctus	56.81	3.00e-126	444.00
IUUC-Dor-030634	Dipodomys ordii	62.39	7.00e-126	442.00
IUUC-Dse-031245	Dothistroma septosporum	21.05	3.00e-04	40.00
IUUC-Ete-032246	Echinops telfairi	62.24	5.00e-121	426.00
IUUC-Eca-034015	Equus caballus	62.76	2.00e-124	437.00
IUUC-Eeu-034902	Erinaceus europaeus	62.39	7.00e-126	442.00
IUUC-Fca-035903	Felis catus	63.77	1.00e-126	445.00
IUUC-Fal-037407	Ficedula albicollis	63.72	3.00e-122	431.00
IUUC-Gmo-039466	Gadus morhua	56.60	5.00e-128	449.00
IUUC-Ggr-040030	Gaeumannomyces graminis	20.69	4.00e-03	36.20
IUUC-Gga-040214	Gallus gallus	63.93	5.00e-130	456.00
IUUC-Gac-042214	Gasterosteus aculeatus	61.89	7.00e-129	452.00
IUUC-Gma-042794	Glycine max	25.16	3.00e-07	50.40
IUUC-Ggo-044988	Gorilla gorilla	63.34	1.00e-125	442.00
IUUC-Hsa-046092	Homo sapiens	63.72	2.00e-126	444.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	62.39	8.00e-126	442.00
IUUC-Lch-049895	Latimeria chalumnae	62.44	1.00e-69	254.00
IUUC-Lpe-050806	Leersia perrieri	23.87	5.00e-06	45.80
IUUC-Loc-052845	Lepisosteus oculatus	63.66	4.00e-123	433.00
IUUC-Lma-053090	Leptosphaeria maculans	21.01	8.00e-05	41.60
IUUC-Laf-054538	Loxodonta africana	64.41	7.00e-127	446.00
IUUC-Mcc-055116	Macaca mulatta	71.12	3.00e-107	380.00
IUUC-Meu-056777	Macropus eugenii	57.43	3.00e-112	397.00
IUUC-Mor-057112	Magnaporthe oryzae	43.75	3.60e-01	28.90
IUUC-Mpo-057376	Magnaporthe poae	21.43	2.00e-04	41.20
IUUC-Mtr-058142	Medicago truncatula	25.16	2.00e-07	50.40
IUUC-Mga-059716	Meleagris gallopavo	63.42	6.00e-122	429.00
IUUC-Mmr-060649	Microcebus murinus	63.05	1.00e-125	442.00
IUUC-Mdo-062535	Monodelphis domestica	63.34	7.00e-124	436.00
IUUC-Mmu-064036	Mus musculus	61.45	1.00e-126	444.00
IUUC-Mac-065338	Musa acuminata	25.97	1.00e-06	47.80
IUUC-Mpu-065719	Mustela putorius furo	62.39	8.00e-126	442.00
IUUC-Mlu-067219	Myotis lucifugus	63.19	8.00e-126	442.00
IUUC-Nfi-068308	Neosartorya fischeri	17.33	6.00e-05	42.00
IUUC-Ncr-068691	Neurospora crassa	22.39	2.00e-04	40.40
IUUC-Nle-068983	Nomascus leucogenys	63.53	4.00e-125	440.00
IUUC-Opr-070467	Ochotona princeps	62.39	7.00e-126	442.00
IUUC-Ont-071566	Oreochromis niloticus	56.06	2.00e-127	448.00
IUUC-Oan-073368	Ornithorhynchus anatinus	62.39	2.00e-126	444.00
IUUC-Ocu-074854	Oryctolagus cuniculus	63.16	3.00e-125	440.00
IUUC-Ome-081687	Oryza meridionalis	22.22	7.00e-04	38.10
IUUC-Ola-086364	Oryzias latipes	62.06	6.00e-127	446.00
IUUC-Oga-088235	Otolemur garnettii	62.65	3.00e-124	437.00
IUUC-Oar-089547	Ovis aries	64.14	2.00e-128	451.00
IUUC-Ptr-091423	Pan troglodytes	63.34	6.00e-125	439.00
IUUC-Pan-092378	Papio anubis	62.39	7.00e-126	442.00
IUUC-Psi-093638	Pelodiscus sinensis	61.00	1.00e-121	428.00
IUUC-Pma-094384	Petromyzon marinus	56.55	7.00e-41	159.00
IUUC-Pno-095027	Phaeosphaeria nodorum	20.45	1.00e-05	44.30
IUUC-Pfo-096031	Poecilia formosa	61.96	1.00e-128	451.00
IUUC-Pab-097886	Pongo abelii	63.53	4.00e-125	440.00
IUUC-Pop-099430	Populus trichocarpa	26.25	5.00e-07	49.30
IUUC-Pca-101138	Procavia capensis	62.39	7.00e-126	442.00
IUUC-Ppe-101293	Prunus persica	25.16	6.00e-06	45.40
IUUC-Pva-103215	Pteropus vampyrus	62.76	8.00e-125	439.00
IUUC-Pte-104238	Pyrenophora teres	24.44	7.00e-05	41.20
IUUC-Rno-105968	Rattus norvegicus	63.42	6.00e-127	446.00
IUUC-Sce-106391	Saccharomyces cerevisiae	19.53	5.00e-02	31.20
IUUC-Sha-107595	Sarcophilus harrisii	62.39	1.00e-124	438.00
IUUC-Sja-107950	Schizosaccharomyces japonicus	18.64	5.00e-05	41.20
IUUC-Ssl-108527	Sclerotinia sclerotiorum	21.10	5.00e-06	45.40
IUUC-Smo-109552	Selaginella moellendorffii	19.55	4.00e-06	46.20
IUUC-Sly-110873	Solanum lycopersicum	25.16	5.00e-07	49.30
IUUC-Stu-112586	Solanum tuberosum	20.90	1.00e-03	38.10
IUUC-Sar-113076	Sorex araneus	66.38	2.00e-95	341.00
IUUC-Sre-115143	Sporisorium reilianum	20.00	9.00e-05	41.60
IUUC-Ssc-115755	Sus scrofa	62.76	2.00e-127	447.00
IUUC-Tgu-117326	Taeniopygia guttata	63.72	2.00e-122	431.00
IUUC-Tru-117858	Takifugu rubripes	62.05	8.00e-127	446.00
IUUC-Tsy-119296	Tarsius syrichta	56.60	7.00e-106	376.00
IUUC-Tni-119822	Tetraodon nigroviridis	61.50	3.00e-124	437.00
IUUC-Tca-120935	Theobroma cacao	25.16	3.00e-07	50.40
IUUC-Tbe-127366	Tupaia belangeri	61.22	3.00e-120	424.00
IUUC-Ttr-128484	Tursiops truncatus	64.33	4.00e-114	403.00
IUUC-Vpa-130304	Vicugna pacos	70.69	2.00e-106	377.00
IUUC-Vvi-131560	Vitis vinifera	22.36	1.00e-05	44.70
IUUC-Xtr-132062	Xenopus tropicalis	65.20	4.00e-130	456.00
IUUC-Xma-134288	Xiphophorus maculatus	57.76	2.00e-128	451.00
IUUC-Yli-134374	Yarrowia lipolytica	19.09	6.00e-03	35.00
IUUC-Zma-135310	Zea mays	22.99	3.00e-04	40.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence