iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-053569

Ensembl Protein ID

ENSLAFP00000009261.4

UniProt Accession

G3T6T4; G3T6T4_LOXAF

Protein Name

Uncharacterized protein

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000011066.4	ENSLAFT00000011067.4	ENSLAFP00000009261.4

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	98.06	2.00e-173	605.00	IUUC-Hsa-046680
UBD/Other/Other	98.06	2.00e-173	605.00	IUUC-Hsa-046680
UBD/Other/Other	37.01	8.00e-50	192.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Loxodonta africana

Protein Sequence
(Fasta)

QFSFNMFDHP IPRVFQNRFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMPP SALDQLSRLN 60
ITYPMLFKLT NKNSDRMTHC GVLEFVADEG ICYLPHWMMQ NLLLEEGGLV QVESVNLQVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGTTCTCCT TCAATATGTT TGACCACCCA ATTCCCCGGG TCTTCCAGAA CCGCTTCTCC 60
ACCCAGTACC GCTGCTTCTC TGTGTCCATG CTAGCAGGGC CTAATGACAG GTCAGATGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	51.56	2.00e-65	242.00
IUUC-Aml-001398	Ailuropoda melanoleuca	98.06	8.00e-175	605.00
IUUC-Atr-002449	Amborella trichopoda	47.71	8.00e-54	203.00
IUUC-Apl-004065	Anas platyrhynchos	91.32	1.00e-139	488.00
IUUC-Aca-004973	Anolis carolinensis	91.91	4.00e-170	590.00
IUUC-Aly-005501	Arabidopsis lyrata	44.19	2.00e-66	245.00
IUUC-Ath-007324	Arabidopsis thaliana	52.36	4.00e-67	248.00
IUUC-Ago-007918	Ashbya gossypii	41.73	4.00e-52	198.00
IUUC-Acl-008362	Aspergillus clavatus	42.56	5.00e-65	241.00
IUUC-Afl-008690	Aspergillus flavus	53.21	2.00e-62	233.00
IUUC-Afu-008787	Aspergillus fumigatus	43.11	2.00e-64	239.00
IUUC-Ani-009385	Aspergillus nidulans	55.62	1.00e-55	210.00
IUUC-Ang-009709	Aspergillus niger	55.39	1.00e-62	233.00
IUUC-Aor-010240	Aspergillus oryzae	53.21	2.00e-62	233.00
IUUC-Ate-010551	Aspergillus terreus	55.77	3.00e-63	235.00
IUUC-Ame-011417	Astyanax mexicanus	87.74	2.00e-156	544.00
IUUC-Bgr-011986	Blumeria graminis	55.38	2.00e-60	225.00
IUUC-Bta-012559	Bos taurus	95.20	5.00e-125	439.00
IUUC-Bci-013767	Botrytis cinerea	55.21	9.00e-57	213.00
IUUC-Bdi-014336	Brachypodium distachyon	51.53	3.00e-64	238.00
IUUC-Bol-015824	Brassica oleracea	44.30	2.00e-65	242.00
IUUC-Bra-016732	Brassica rapa	43.97	3.00e-65	241.00
IUUC-Cel-018590	Caenorhabditis elegans	40.07	3.00e-48	185.00
IUUC-Cja-019487	Callithrix jacchus	97.41	4.00e-174	603.00
IUUC-Cfa-020497	Canis familiaris	97.73	3.00e-174	603.00
IUUC-Cpo-022150	Cavia porcellus	97.73	3.00e-174	603.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	50.43	3.00e-57	214.00
IUUC-Csa-023602	Chlorocebus sabaeus	98.06	7.00e-175	605.00
IUUC-Cin-025594	Ciona intestinalis	57.28	6.00e-92	330.00
IUUC-Csv-026040	Ciona savignyi	54.89	3.00e-93	334.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	47.40	1.00e-50	193.00
IUUC-Cne-026990	Cryptococcus neoformans	41.84	5.00e-38	152.00
IUUC-Cme-027323	Cyanidioschyzon merolae	33.55	1.00e-42	167.00
IUUC-Dre-027987	Danio rerio	85.48	5.00e-151	526.00
IUUC-Dor-030294	Dipodomys ordii	96.12	1.00e-171	595.00
IUUC-Dse-031411	Dothistroma septosporum	37.61	1.00e-54	206.00
IUUC-Dme-031798	Drosophila melanogaster	55.35	2.00e-90	325.00
IUUC-Ete-032432	Echinops telfairi	96.76	2.00e-172	597.00
IUUC-Eca-034427	Equus caballus	98.06	7.00e-175	605.00
IUUC-Eeu-034917	Erinaceus europaeus	100.00	8.00e-90	323.00
IUUC-Fca-035380	Felis catus	97.73	3.00e-174	603.00
IUUC-Fal-037659	Ficedula albicollis	92.79	2.00e-165	574.00
IUUC-Fox-038062	Fusarium oxysporum	44.90	4.00e-21	94.00
IUUC-Fso-038111	Fusarium solani	36.23	4.00e-52	198.00
IUUC-Gmo-039298	Gadus morhua	85.90	1.00e-145	508.00
IUUC-Ggr-039771	Gaeumannomyces graminis	50.25	1.00e-54	206.00
IUUC-Gga-040313	Gallus gallus	93.53	9.00e-169	585.00
IUUC-Gac-042009	Gasterosteus aculeatus	84.62	1.00e-144	505.00
IUUC-Gma-043844	Glycine max	52.05	1.00e-65	243.00
IUUC-Ggo-044639	Gorilla gorilla	87.54	6.00e-169	586.00
IUUC-Hsa-046680	Homo sapiens	98.06	7.00e-175	605.00
IUUC-Hvu-047614	Hordeum vulgare	52.02	2.00e-65	242.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	98.06	8.00e-175	605.00
IUUC-Kpa-049136	Komagataella pastoris	36.22	2.00e-53	202.00
IUUC-Lch-050607	Latimeria chalumnae	87.87	1.00e-154	538.00
IUUC-Lpe-050726	Leersia perrieri	50.00	5.00e-60	224.00
IUUC-Loc-051848	Lepisosteus oculatus	88.10	2.00e-158	551.00
IUUC-Lma-053187	Leptosphaeria maculans	41.27	2.00e-63	235.00
IUUC-Mcc-055275	Macaca mulatta	97.73	7.00e-174	602.00
IUUC-Mor-056967	Magnaporthe oryzae	49.49	4.00e-55	208.00
IUUC-Mpo-057399	Magnaporthe poae	50.76	5.00e-55	207.00
IUUC-Mtr-058353	Medicago truncatula	50.64	8.00e-64	236.00
IUUC-Mla-058830	Melampsora laricipopulina	43.88	2.00e-41	162.00
IUUC-Mga-059803	Meleagris gallopavo	92.45	5.00e-141	493.00
IUUC-Mvi-060456	Microbotryum violaceum	46.07	6.00e-44	171.00
IUUC-Mmr-060573	Microcebus murinus	97.73	3.00e-174	603.00
IUUC-Mdo-062831	Monodelphis domestica	96.44	1.00e-173	601.00
IUUC-Mmu-064302	Mus musculus	96.76	1.00e-172	598.00
IUUC-Mac-064745	Musa acuminata	52.17	9.00e-65	240.00
IUUC-Mpu-065922	Mustela putorius furo	97.73	1.00e-174	605.00
IUUC-Mlu-068236	Myotis lucifugus	98.38	4.00e-177	613.00
IUUC-Nfi-068417	Neosartorya fischeri	43.11	2.00e-64	239.00
IUUC-Ncr-068747	Neurospora crassa	48.19	8.00e-52	197.00
IUUC-Nle-069948	Nomascus leucogenys	87.57	5.00e-170	590.00
IUUC-Opr-070919	Ochotona princeps	82.18	3.00e-136	477.00
IUUC-Ont-071467	Oreochromis niloticus	85.62	2.00e-151	528.00
IUUC-Oan-073436	Ornithorhynchus anatinus	76.51	6.00e-70	256.00
IUUC-Ocu-074427	Oryctolagus cuniculus	96.12	3.00e-164	570.00
IUUC-Oba-075440	Oryza barthii	51.05	4.00e-66	244.00
IUUC-Obr-076275	Oryza brachyantha	50.45	2.00e-58	218.00
IUUC-Ogl-077237	Oryza glaberrima	51.05	5.00e-66	244.00
IUUC-Ogu-078934	Oryza glumaepatula	51.05	4.00e-66	244.00
IUUC-Oin-079475	Oryza indica	51.46	2.00e-66	245.00
IUUC-Olo-080285	Oryza longistaminata	57.30	6.00e-56	209.00
IUUC-Ome-081887	Oryza meridionalis	50.63	1.00e-65	242.00
IUUC-Oni-082064	Oryza nivara	51.46	2.00e-66	245.00
IUUC-Opu-083610	Oryza punctata	50.63	2.00e-65	242.00
IUUC-Oru-084911	Oryza rufipogon	44.48	1.00e-67	249.00
IUUC-Osa-085366	Oryza sativa	51.05	4.00e-66	244.00
IUUC-Ola-086846	Oryzias latipes	75.14	2.00e-136	478.00
IUUC-Olu-087879	Ostreococcus lucimarinus	44.96	3.00e-55	208.00
IUUC-Oga-089017	Otolemur garnettii	99.03	1.00e-178	618.00
IUUC-Oar-089970	Ovis aries	93.23	1.00e-166	578.00
IUUC-Ptr-091147	Pan troglodytes	88.75	4.00e-159	553.00
IUUC-Pan-091757	Papio anubis	90.68	4.00e-156	543.00
IUUC-Psi-093931	Pelodiscus sinensis	93.85	4.00e-169	586.00
IUUC-Pno-094775	Phaeosphaeria nodorum	47.96	2.00e-57	216.00
IUUC-Ppa-095156	Physcomitrella patens	51.10	5.00e-62	231.00
IUUC-Pfo-097295	Poecilia formosa	84.35	6.00e-149	519.00
IUUC-Pab-098537	Pongo abelii	98.06	7.00e-175	605.00
IUUC-Pop-099436	Populus trichocarpa	49.40	5.00e-67	247.00
IUUC-Pca-100631	Procavia capensis	86.17	1.00e-164	572.00
IUUC-Ppe-101259	Prunus persica	50.21	4.00e-65	241.00
IUUC-Pva-102679	Pteropus vampyrus	89.10	1.00e-155	542.00
IUUC-Pgr-103475	Puccinia graminis	42.98	1.00e-43	170.00
IUUC-Ptt-104012	Puccinia triticina	36.84	4.00e-31	128.00
IUUC-Pte-104071	Pyrenophora teres	47.28	3.00e-60	225.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	47.28	3.00e-60	225.00
IUUC-Rno-104858	Rattus norvegicus	97.09	7.00e-173	599.00
IUUC-Sce-106174	Saccharomyces cerevisiae	38.67	2.00e-52	199.00
IUUC-Sha-107075	Sarcophilus harrisii	95.81	1.00e-172	598.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	43.19	3.00e-58	218.00
IUUC-Spo-108259	Schizosaccharomyces pombe	50.27	4.00e-53	201.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	38.92	3.00e-49	188.00
IUUC-Smo-109290	Selaginella moellendorffii	53.02	1.00e-64	239.00
IUUC-Sit-109992	Setaria italica	49.37	2.00e-63	236.00
IUUC-Sly-110858	Solanum lycopersicum	51.33	1.00e-62	233.00
IUUC-Stu-112129	Solanum tuberosum	50.89	2.00e-63	235.00
IUUC-Sar-113061	Sorex araneus	98.38	4.00e-176	610.00
IUUC-Sbi-114882	Sorghum bicolor	44.03	8.00e-65	240.00
IUUC-Sre-115104	Sporisorium reilianum	46.39	5.00e-43	168.00
IUUC-Ssc-115403	Sus scrofa	97.09	2.00e-173	600.00
IUUC-Tgu-117013	Taeniopygia guttata	93.20	3.00e-168	583.00
IUUC-Tru-118307	Takifugu rubripes	85.90	3.00e-148	517.00
IUUC-Tsy-119309	Tarsius syrichta	85.52	2.00e-65	242.00
IUUC-Tni-120209	Tetraodon nigroviridis	85.21	3.00e-145	507.00
IUUC-Tca-121421	Theobroma cacao	50.64	1.00e-65	243.00
IUUC-Tre-122235	Trichoderma reesei	45.18	4.00e-50	191.00
IUUC-Tvi-122421	Trichoderma virens	45.15	1.00e-50	193.00
IUUC-Tae-124587	Triticum aestivum	51.56	7.00e-66	243.00
IUUC-Tur-126353	Triticum urartu	36.84	1.00e-23	104.00
IUUC-Tme-126918	Tuber melanosporum	53.12	4.00e-57	215.00
IUUC-Ttr-129286	Tursiops truncatus	87.61	5.00e-158	550.00
IUUC-Uma-129404	Ustilago maydis	47.42	2.00e-44	172.00
IUUC-Vda-129746	Verticillium dahliae	47.74	8.00e-52	197.00
IUUC-Vpa-130648	Vicugna pacos	63.74	7.00e-24	104.00
IUUC-Vvi-131301	Vitis vinifera	51.50	7.00e-65	240.00
IUUC-Xtr-132583	Xenopus tropicalis	89.64	4.00e-161	560.00
IUUC-Xma-133129	Xiphophorus maculatus	84.66	5.00e-149	520.00
IUUC-Yli-134515	Yarrowia lipolytica	45.73	1.00e-49	190.00
IUUC-Zma-135266	Zea mays	43.30	1.00e-64	239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence