iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115723

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU313312

Gene Name

RNF20

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000005399.2	ENSSSCT00000005942.2	ENSSSCP00000005795.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	36.13	2.00e-35	148.00	IUUC-Cel-018659
E3 activity/RING/RING	98.26	0.00e+00	1615.00	IUUC-Hsa-046462
E3 activity/RING/RING	24.34	1.00e-12	70.50	IUUC-Sce-106384
E3 activity/RING/RING	43.08	2.00e-14	75.90	IUUC-Spo-108304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MSGIGNKRAA GEPGTSVPPE KKTAVEDSGT TVETIKLGGV SSTEELDIRT LQTKNRKLAE 60
MLDQRQAIED ELREHIEKLE RRQATDDASL LIVNRYWSQF DENIRIILKR YDLEQGLGDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGGTGAGA GGTTGCGGGG GTGCTACGCG GACCTCGGTG AGTAACTGCC CAGAGTTCTG 60
TTCCCTGGCG GCGCAGGTTG GAAGAACTCA GGTTAGATCT CGGCCAAGGA AGGGACCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR015422--PyrdxlP-dep_Trfase_sub2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0033503--C:HULC complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0003682--F:chromatin binding
GO:0003730--F:mRNA 3'-UTR binding
GO:0003713--F:transcription coactivator activity
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:0030336--P:negative regulation of cell migration
GO:1900364--P:negative regulation of mRNA polyadenylation
GO:2001168--P:positive regulation of histone H2B ubiquitination
GO:0031062--P:positive regulation of histone methylation
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0000209--P:protein polyubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ssc:100154259

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000858	Aegilops tauschii	45.45	1.00e-09	56.60
IUUC-Aml-001976	Ailuropoda melanoleuca	98.56	0.00e+00	1684.00
IUUC-Apl-003407	Anas platyrhynchos	87.54	0.00e+00	955.00
IUUC-Aca-004246	Anolis carolinensis	87.01	0.00e+00	937.00
IUUC-Ago-007988	Ashbya gossypii	31.69	4.00e-15	76.30
IUUC-Acl-008319	Aspergillus clavatus	25.85	2.00e-14	73.90
IUUC-Ang-009601	Aspergillus niger	26.14	1.00e-15	78.20
IUUC-Aor-010142	Aspergillus oryzae	28.62	1.00e-15	78.20
IUUC-Ate-010547	Aspergillus terreus	26.15	2.00e-14	74.30
IUUC-Ame-011916	Astyanax mexicanus	77.93	1.00e-143	504.00
IUUC-Bgr-012245	Blumeria graminis	41.51	4.00e-10	59.70
IUUC-Bta-012357	Bos taurus	98.46	0.00e+00	1640.00
IUUC-Bol-016588	Brassica oleracea	30.69	2.00e-24	107.00
IUUC-Bra-017335	Brassica rapa	30.69	1.00e-24	108.00
IUUC-Cel-018659	Caenorhabditis elegans	34.41	6.00e-40	159.00
IUUC-Cja-019244	Callithrix jacchus	98.14	0.00e+00	1014.00
IUUC-Cfa-020320	Canis familiaris	98.77	0.00e+00	1669.00
IUUC-Cpo-021617	Cavia porcellus	94.77	0.00e+00	1675.00
IUUC-Csa-023509	Chlorocebus sabaeus	98.26	0.00e+00	1601.00
IUUC-Cho-024616	Choloepus hoffmanni	81.36	0.00e+00	992.00
IUUC-Csv-025830	Ciona savignyi	53.42	2.00e-91	330.00
IUUC-Cne-026878	Cryptococcus neoformans	25.08	4.00e-14	73.60
IUUC-Cme-027134	Cyanidioschyzon merolae	39.06	8.00e-14	72.00
IUUC-Dre-028146	Danio rerio	61.80	0.00e+00	934.00
IUUC-Dno-029537	Dasypus novemcinctus	96.11	0.00e+00	1594.00
IUUC-Dor-030250	Dipodomys ordii	95.79	0.00e+00	1564.00
IUUC-Dse-031300	Dothistroma septosporum	38.46	2.00e-15	77.80
IUUC-Ete-033164	Echinops telfairi	94.39	0.00e+00	1243.00
IUUC-Eca-033347	Equus caballus	98.16	0.00e+00	1634.00
IUUC-Eeu-034801	Erinaceus europaeus	94.49	0.00e+00	649.00
IUUC-Fca-036024	Felis catus	98.67	0.00e+00	1691.00
IUUC-Fal-037622	Ficedula albicollis	88.61	0.00e+00	963.00
IUUC-Fox-038017	Fusarium oxysporum	24.66	2.00e-10	60.50
IUUC-Gmo-039446	Gadus morhua	77.55	2.00e-132	466.00
IUUC-Ggr-040117	Gaeumannomyces graminis	45.28	2.00e-11	64.70
IUUC-Gga-040412	Gallus gallus	89.56	0.00e+00	911.00
IUUC-Gac-042205	Gasterosteus aculeatus	58.93	1.00e-140	493.00
IUUC-Ggo-044703	Gorilla gorilla	98.15	0.00e+00	1600.00
IUUC-Hsa-046462	Homo sapiens	98.26	0.00e+00	1601.00
IUUC-Hvu-047689	Hordeum vulgare	27.00	2.00e-27	117.00
IUUC-Itr-048298	Ictidomys tridecemlineatus	98.33	0.00e+00	1614.00
IUUC-Lch-049505	Latimeria chalumnae	74.82	0.00e+00	710.00
IUUC-Loc-051951	Lepisosteus oculatus	63.47	3.00e-112	399.00
IUUC-Lma-053312	Leptosphaeria maculans	28.71	4.00e-15	76.30
IUUC-Laf-054122	Loxodonta africana	97.13	0.00e+00	1619.00
IUUC-Mcc-054647	Macaca mulatta	98.26	0.00e+00	1601.00
IUUC-Meu-056559	Macropus eugenii	92.12	0.00e+00	1466.00
IUUC-Mpo-057568	Magnaporthe poae	45.28	2.00e-11	64.30
IUUC-Mtr-058247	Medicago truncatula	27.95	4.00e-26	113.00
IUUC-Mla-059072	Melampsora laricipopulina	25.62	6.00e-25	109.00
IUUC-Mga-059731	Meleagris gallopavo	66.49	3.00e-176	612.00
IUUC-Mmr-061495	Microcebus murinus	97.95	0.00e+00	1668.00
IUUC-Mdo-062599	Monodelphis domestica	94.13	0.00e+00	992.00
IUUC-Mmu-063278	Mus musculus	96.72	0.00e+00	1607.00
IUUC-Mpu-065910	Mustela putorius furo	97.95	0.00e+00	1669.00
IUUC-Mlu-067040	Myotis lucifugus	97.54	0.00e+00	1604.00
IUUC-Ncr-068695	Neurospora crassa	27.31	2.00e-12	67.40
IUUC-Nle-069058	Nomascus leucogenys	98.32	0.00e+00	1016.00
IUUC-Opr-071149	Ochotona princeps	97.24	0.00e+00	1009.00
IUUC-Ont-072543	Oreochromis niloticus	75.00	1.00e-133	470.00
IUUC-Oan-072996	Ornithorhynchus anatinus	96.97	0.00e+00	647.00
IUUC-Ocu-074773	Oryctolagus cuniculus	98.36	0.00e+00	1603.00
IUUC-Ola-087287	Oryzias latipes	74.53	1.00e-132	467.00
IUUC-Olu-087683	Ostreococcus lucimarinus	36.36	8.00e-14	68.60
IUUC-Oga-088961	Otolemur garnettii	98.15	0.00e+00	1651.00
IUUC-Oar-089755	Ovis aries	98.67	0.00e+00	1626.00
IUUC-Ptr-091602	Pan troglodytes	98.26	0.00e+00	1601.00
IUUC-Pan-092263	Papio anubis	98.26	0.00e+00	1601.00
IUUC-Psi-093554	Pelodiscus sinensis	89.25	0.00e+00	959.00
IUUC-Pno-095079	Phaeosphaeria nodorum	33.33	5.00e-13	69.70
IUUC-Ppa-095735	Physcomitrella patens	31.79	2.00e-39	157.00
IUUC-Pab-098598	Pongo abelii	98.05	0.00e+00	1598.00
IUUC-Pca-100157	Procavia capensis	95.97	0.00e+00	1000.00
IUUC-Pva-102720	Pteropus vampyrus	97.85	0.00e+00	1605.00
IUUC-Pgr-103536	Puccinia graminis	24.23	9.00e-21	95.50
IUUC-Rno-104996	Rattus norvegicus	96.21	0.00e+00	1029.00
IUUC-Sce-106384	Saccharomyces cerevisiae	23.97	5.00e-15	76.30
IUUC-Sha-107000	Sarcophilus harrisii	95.57	0.00e+00	973.00
IUUC-Sja-107993	Schizosaccharomyces japonicus	45.00	1.00e-12	68.20
IUUC-Spo-108304	Schizosaccharomyces pombe	43.08	6.00e-15	75.90
IUUC-Smo-109550	Selaginella moellendorffii	29.63	5.00e-38	152.00
IUUC-Sar-113349	Sorex araneus	96.88	0.00e+00	942.00
IUUC-Sbi-114734	Sorghum bicolor	30.08	1.00e-23	102.00
IUUC-Sre-115087	Sporisorium reilianum	35.29	7.00e-16	79.30
IUUC-Tgu-116549	Taeniopygia guttata	88.45	0.00e+00	893.00
IUUC-Tsy-118808	Tarsius syrichta	95.56	0.00e+00	1187.00
IUUC-Tni-120790	Tetraodon nigroviridis	61.60	0.00e+00	938.00
IUUC-Ttr-128266	Tursiops truncatus	98.26	0.00e+00	1629.00
IUUC-Uma-129488	Ustilago maydis	25.25	3.00e-18	86.70
IUUC-Vpa-130237	Vicugna pacos	98.67	0.00e+00	1680.00
IUUC-Xtr-132589	Xenopus tropicalis	73.85	0.00e+00	1226.00
IUUC-Zma-135805	Zea mays	27.42	4.00e-27	116.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence