iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113893

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G223600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g027720	Sb09g027720.1	Sb09g027720.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	8.80e-06	26.6	15	53

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 103  ldrlpeeilveilklldkeellraarvcrrwqelasqka 141
            + lpee++ e++ +l+ +++lr++ vcr+w+ + s+++
   Q: 15   AHFLPEEMMTEVFLRLPVKSILRFRAVCRSWNAVLSSDE 53
           5679****************************8777554 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MMIGNKRRAV ASGAAHFLPE EMMTEVFLRL PVKSILRFRA VCRSWNAVLS SDEFCCLHMA 60
RAEAEPAPPS LFFTSPTAGF DATAVYLSSS SGPDDGLLFT LDDVCGGDFI HMTPAPCRGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGATCG GGAATAAGAG AAGGGCTGTA GCATCTGGTG CTGCACATTT CCTGCCGGAG 60
GAGATGATGA CAGAGGTGTT CCTACGGCTG CCTGTCAAAT CCATTCTTCG CTTTCGGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013187--F-box-assoc_dom_typ3
IPR017451--F-box-assoc_interact_dom
IPR001810--F-box_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF08268--FBA_3

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_09g027720

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014683	Brachypodium distachyon	35.74	5.00e-111	394.00
IUUC-Cel-018409	Caenorhabditis elegans	37.50	3.20e-02	32.00
IUUC-Gma-043754	Glycine max	22.61	1.00e-10	60.10
IUUC-Lpe-051032	Leersia perrieri	48.00	0.00e+00	741.00
IUUC-Mac-065172	Musa acuminata	24.66	1.00e-04	40.00
IUUC-Ncr-068923	Neurospora crassa	37.50	4.20e+00	25.80
IUUC-Oba-075410	Oryza barthii	55.41	0.00e+00	832.00
IUUC-Obr-076542	Oryza brachyantha	23.06	3.00e-20	92.00
IUUC-Ogl-077729	Oryza glaberrima	55.41	0.00e+00	832.00
IUUC-Ogu-077953	Oryza glumaepatula	55.41	0.00e+00	833.00
IUUC-Oin-079638	Oryza indica	64.52	3.00e-47	180.00
IUUC-Olo-080966	Oryza longistaminata	52.53	0.00e+00	841.00
IUUC-Ome-081396	Oryza meridionalis	31.13	3.00e-27	115.00
IUUC-Oni-082495	Oryza nivara	55.41	0.00e+00	832.00
IUUC-Opu-083922	Oryza punctata	30.21	1.00e-23	103.00
IUUC-Oru-084884	Oryza rufipogon	55.41	0.00e+00	832.00
IUUC-Osa-085690	Oryza sativa	55.41	0.00e+00	832.00
IUUC-Pno-094803	Phaeosphaeria nodorum	37.14	4.80e-02	31.20
IUUC-Sit-109871	Setaria italica	65.63	0.00e+00	1120.00
IUUC-Tca-121543	Theobroma cacao	22.18	6.00e-23	101.00
IUUC-Tur-126635	Triticum urartu	34.41	7.00e-101	361.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence