iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ont-072374

Ensembl Protein ID

ENSONIP00000015948.1

UniProt Accession

I3K4A3; I3K4A3_ORENI

Genbank Protein ID

ENSONIP00000015948

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AERX01031792

Gene Name

prpf4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000012671.1	ENSONIT00000015963.1	ENSONIP00000015948.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-40	135.2	407	445
UBD/Beta-Prp	5.40e-94	315.1	232	462

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH  ++++l+f ++  +l++Gs+D+t+kvW+lr  ++l 
   Q: 407  GHLKEIYSLHFsPNgYHLATGSGDNTCKVWELRNRKCLY 445
           7999********77799****************999875 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk........ilvtgseDrtikvwdlstgkcvht 89
           ++ +i+  +fspd+++lat+s++g  k+w+v + +l+r+l gh+  v av f p++          l++++ D+t+k+w+l++ ++v  
   Q: 232  DDRPISFCHFSPDSKMLATASWSGLCKLWSVPDCNLIRTLRGHNTNVGAVVFRPQAGvslsqsdvSLASCAADGTVKLWNLESDEPVAD 320
           6889999*********************************************99999999999999*********************** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           ++gh+++v  +s++psg +l ++  d   r+wdle ++++   ++gh++ v  +++hpdg+l ++G+lD + r+Wdl+tg+++  l+g 
   Q: 321  IEGHSERVSRVSWHPSGRFLGTTCYDYSWRLWDLEVQEEIL-HQEGHSKGVHDLTFHPDGSLAATGGLDAFGRVWDLRTGRCVVFLEG- 407
           *****************************************.********************************************99. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspn 233
           h + +ysl f++ng +l++gs d+t k+w+l++ +c++t+ +h++  + vrf p 
   Q: 408  HLKEIYSLHFSPNGYHLATGSGDNTCKVWELRNRKCLYTVPAHQNLLSAVRFQPT 462
           ***************************************************9865 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

EGSSRNSDWK KEVNMSDEED VAPAVKKSRV FYGSLEEKER ERLSANVASS TATGSDAVRA 60
GIEAGNINIS SGETLEIEER VSERQQEALA EFERRRRARQ ITVSTDDAEV KAGLRALGEP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCTGTGTC CACCGGAAGT GTGCAACCTC TGAGCCGGAG ACACTTCAGA ACTTCCGGGT 60
CACGAAGCTC CGCGTAGGCG CGTCGTTCGT TTCCTCCGGT AAGTATGTCT CATTCAACGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0043009--P:chordate embryonic development
GO:0060041--P:retina development in camera-type eye

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	44.63	6.00e-104	370.00
IUUC-Aml-001737	Ailuropoda melanoleuca	76.98	0.00e+00	803.00
IUUC-Atr-002828	Amborella trichopoda	43.33	7.00e-105	374.00
IUUC-Apl-003723	Anas platyrhynchos	76.92	0.00e+00	804.00
IUUC-Aca-004972	Anolis carolinensis	74.76	0.00e+00	758.00
IUUC-Aly-006531	Arabidopsis lyrata	41.15	2.00e-90	327.00
IUUC-Ath-007367	Arabidopsis thaliana	43.14	6.00e-106	378.00
IUUC-Ago-007893	Ashbya gossypii	34.42	6.00e-54	205.00
IUUC-Acl-008236	Aspergillus clavatus	38.46	1.00e-81	297.00
IUUC-Afl-008522	Aspergillus flavus	39.79	1.00e-92	333.00
IUUC-Afu-008904	Aspergillus fumigatus	38.95	1.00e-86	313.00
IUUC-Ani-009198	Aspergillus nidulans	39.83	7.00e-92	331.00
IUUC-Ang-009662	Aspergillus niger	41.59	2.00e-91	330.00
IUUC-Aor-009881	Aspergillus oryzae	39.79	1.00e-92	333.00
IUUC-Ate-010333	Aspergillus terreus	38.33	1.00e-82	300.00
IUUC-Ame-011697	Astyanax mexicanus	80.20	0.00e+00	817.00
IUUC-Bgr-012254	Blumeria graminis	39.83	8.00e-97	347.00
IUUC-Bta-012615	Bos taurus	76.59	0.00e+00	791.00
IUUC-Bci-013720	Botrytis cinerea	39.70	3.00e-97	349.00
IUUC-Bdi-014302	Brachypodium distachyon	44.60	5.00e-108	385.00
IUUC-Bol-015594	Brassica oleracea	42.86	2.00e-96	346.00
IUUC-Bra-017465	Brassica rapa	42.64	2.00e-96	346.00
IUUC-Cel-018632	Caenorhabditis elegans	45.35	1.00e-108	387.00
IUUC-Cja-019747	Callithrix jacchus	75.10	0.00e+00	808.00
IUUC-Cfa-020288	Canis familiaris	76.98	0.00e+00	805.00
IUUC-Cpo-021440	Cavia porcellus	75.64	0.00e+00	791.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	46.28	2.00e-86	312.00
IUUC-Csa-023139	Chlorocebus sabaeus	79.58	8.00e-171	592.00
IUUC-Cho-024481	Choloepus hoffmanni	76.55	0.00e+00	713.00
IUUC-Cin-025106	Ciona intestinalis	59.48	4.00e-177	614.00
IUUC-Csv-026087	Ciona savignyi	58.22	3.00e-174	605.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	38.17	3.00e-90	327.00
IUUC-Cne-026793	Cryptococcus neoformans	40.43	6.00e-102	364.00
IUUC-Dre-028723	Danio rerio	80.20	0.00e+00	796.00
IUUC-Dno-029299	Dasypus novemcinctus	76.79	0.00e+00	802.00
IUUC-Dor-030345	Dipodomys ordii	51.48	8.00e-65	241.00
IUUC-Dse-031562	Dothistroma septosporum	35.91	2.00e-82	299.00
IUUC-Dme-031783	Drosophila melanogaster	50.09	1.00e-133	470.00
IUUC-Ete-032669	Echinops telfairi	77.58	0.00e+00	806.00
IUUC-Eca-033566	Equus caballus	76.98	0.00e+00	803.00
IUUC-Eeu-034524	Erinaceus europaeus	80.75	1.00e-124	440.00
IUUC-Fca-036215	Felis catus	76.98	0.00e+00	805.00
IUUC-Fal-037018	Ficedula albicollis	77.03	0.00e+00	677.00
IUUC-Fox-037936	Fusarium oxysporum	36.86	1.00e-80	293.00
IUUC-Fso-038366	Fusarium solani	38.72	1.00e-88	320.00
IUUC-Gmo-038966	Gadus morhua	71.43	1.00e-152	532.00
IUUC-Ggr-039942	Gaeumannomyces graminis	37.53	3.00e-83	302.00
IUUC-Gga-040797	Gallus gallus	76.68	0.00e+00	800.00
IUUC-Gac-042598	Gasterosteus aculeatus	79.96	0.00e+00	775.00
IUUC-Gma-044220	Glycine max	46.06	9.00e-104	370.00
IUUC-Ggo-044682	Gorilla gorilla	76.83	0.00e+00	797.00
IUUC-Hsa-045804	Homo sapiens	75.10	0.00e+00	806.00
IUUC-Hvu-047567	Hordeum vulgare	43.72	5.00e-98	351.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	75.29	0.00e+00	806.00
IUUC-Kpa-049369	Komagataella pastoris	34.15	2.00e-62	233.00
IUUC-Lch-050074	Latimeria chalumnae	72.12	0.00e+00	729.00
IUUC-Lpe-051333	Leersia perrieri	43.33	5.00e-101	361.00
IUUC-Loc-052164	Lepisosteus oculatus	81.37	0.00e+00	829.00
IUUC-Lma-053088	Leptosphaeria maculans	36.36	1.00e-81	296.00
IUUC-Laf-053460	Loxodonta africana	74.71	0.00e+00	805.00
IUUC-Mcc-055859	Macaca mulatta	76.98	0.00e+00	805.00
IUUC-Meu-056134	Macropus eugenii	74.71	0.00e+00	801.00
IUUC-Mor-057251	Magnaporthe oryzae	36.17	5.00e-82	298.00
IUUC-Mpo-057375	Magnaporthe poae	40.40	3.00e-52	198.00
IUUC-Mtr-057656	Medicago truncatula	47.61	3.00e-100	358.00
IUUC-Mla-059145	Melampsora laricipopulina	39.47	3.00e-94	338.00
IUUC-Mga-059855	Meleagris gallopavo	76.13	0.00e+00	793.00
IUUC-Mvi-060372	Microbotryum violaceum	43.51	3.00e-97	348.00
IUUC-Mmr-060826	Microcebus murinus	76.98	0.00e+00	803.00
IUUC-Mdo-062748	Monodelphis domestica	75.94	0.00e+00	803.00
IUUC-Mmu-063351	Mus musculus	76.79	0.00e+00	801.00
IUUC-Mac-064846	Musa acuminata	45.85	9.00e-99	353.00
IUUC-Mpu-066006	Mustela putorius furo	76.98	0.00e+00	805.00
IUUC-Mlu-067398	Myotis lucifugus	76.79	0.00e+00	801.00
IUUC-Nfi-068399	Neosartorya fischeri	38.74	3.00e-92	332.00
IUUC-Ncr-068711	Neurospora crassa	37.92	1.00e-90	327.00
IUUC-Nle-069982	Nomascus leucogenys	75.10	0.00e+00	808.00
IUUC-Opr-070596	Ochotona princeps	75.29	0.00e+00	809.00
IUUC-Oan-073166	Ornithorhynchus anatinus	78.26	0.00e+00	652.00
IUUC-Ocu-074371	Oryctolagus cuniculus	77.18	0.00e+00	806.00
IUUC-Oba-075083	Oryza barthii	42.76	7.00e-100	357.00
IUUC-Obr-076405	Oryza brachyantha	43.56	2.00e-99	355.00
IUUC-Ogl-077683	Oryza glaberrima	42.76	5.00e-100	358.00
IUUC-Ogu-078486	Oryza glumaepatula	42.99	9.00e-100	357.00
IUUC-Oin-079679	Oryza indica	42.76	3.00e-102	366.00
IUUC-Olo-080243	Oryza longistaminata	45.10	2.00e-90	325.00
IUUC-Ome-081230	Oryza meridionalis	42.76	3.00e-102	365.00
IUUC-Oni-082961	Oryza nivara	42.76	2.00e-102	365.00
IUUC-Opu-083189	Oryza punctata	42.83	2.00e-100	359.00
IUUC-Oru-084353	Oryza rufipogon	42.76	4.00e-102	365.00
IUUC-Osa-085458	Oryza sativa	42.76	3.00e-102	365.00
IUUC-Ola-086940	Oryzias latipes	90.00	0.00e+00	906.00
IUUC-Olu-087580	Ostreococcus lucimarinus	35.86	2.00e-62	233.00
IUUC-Oga-088703	Otolemur garnettii	72.82	0.00e+00	754.00
IUUC-Oar-089829	Ovis aries	74.76	0.00e+00	790.00
IUUC-Ptr-090838	Pan troglodytes	75.10	0.00e+00	806.00
IUUC-Pan-092261	Papio anubis	75.14	0.00e+00	807.00
IUUC-Psi-093020	Pelodiscus sinensis	75.93	0.00e+00	802.00
IUUC-Pno-094858	Phaeosphaeria nodorum	36.93	1.00e-76	280.00
IUUC-Ppa-095531	Physcomitrella patens	45.22	2.00e-114	406.00
IUUC-Pfo-096812	Poecilia formosa	85.66	0.00e+00	839.00
IUUC-Pab-097805	Pongo abelii	68.85	0.00e+00	692.00
IUUC-Pop-100051	Populus trichocarpa	43.75	2.00e-104	373.00
IUUC-Pca-100152	Procavia capensis	76.79	0.00e+00	804.00
IUUC-Ppe-101244	Prunus persica	45.27	4.00e-107	381.00
IUUC-Pva-102529	Pteropus vampyrus	71.65	0.00e+00	761.00
IUUC-Pgr-103550	Puccinia graminis	34.95	4.00e-93	335.00
IUUC-Ptt-103951	Puccinia triticina	32.81	6.00e-72	265.00
IUUC-Pte-104151	Pyrenophora teres	35.53	8.00e-77	281.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	36.16	8.00e-79	288.00
IUUC-Rno-105747	Rattus norvegicus	76.79	0.00e+00	800.00
IUUC-Sce-106418	Saccharomyces cerevisiae	34.97	6.00e-69	254.00
IUUC-Sha-107334	Sarcophilus harrisii	75.74	0.00e+00	801.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	37.53	1.00e-73	270.00
IUUC-Spo-108189	Schizosaccharomyces pombe	36.47	3.00e-77	282.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	39.27	1.00e-95	343.00
IUUC-Smo-108924	Selaginella moellendorffii	44.44	8.00e-109	387.00
IUUC-Sit-110102	Setaria italica	42.56	4.00e-101	362.00
IUUC-Sly-111668	Solanum lycopersicum	46.41	5.00e-107	381.00
IUUC-Stu-111928	Solanum tuberosum	46.19	9.00e-107	380.00
IUUC-Sar-113266	Sorex araneus	67.66	0.00e+00	667.00
IUUC-Sbi-114134	Sorghum bicolor	42.79	2.00e-101	363.00
IUUC-Sre-115114	Sporisorium reilianum	41.79	8.00e-99	354.00
IUUC-Ssc-115443	Sus scrofa	76.98	0.00e+00	803.00
IUUC-Tgu-117157	Taeniopygia guttata	77.58	0.00e+00	771.00
IUUC-Tru-118587	Takifugu rubripes	86.41	0.00e+00	872.00
IUUC-Tsy-119157	Tarsius syrichta	78.46	0.00e+00	657.00
IUUC-Tni-120427	Tetraodon nigroviridis	87.87	0.00e+00	887.00
IUUC-Tca-121368	Theobroma cacao	45.56	4.00e-108	385.00
IUUC-Tre-122074	Trichoderma reesei	37.92	7.00e-86	311.00
IUUC-Tvi-122349	Trichoderma virens	37.15	2.00e-84	306.00
IUUC-Tae-125651	Triticum aestivum	44.63	5.00e-104	371.00
IUUC-Tur-126532	Triticum urartu	43.86	5.00e-93	335.00
IUUC-Tme-126951	Tuber melanosporum	40.00	5.00e-99	355.00
IUUC-Tbe-128136	Tupaia belangeri	68.20	0.00e+00	712.00
IUUC-Ttr-129169	Tursiops truncatus	78.86	4.00e-131	461.00
IUUC-Uma-129399	Ustilago maydis	41.32	1.00e-96	347.00
IUUC-Vda-129842	Verticillium dahliae	38.63	3.00e-90	325.00
IUUC-Vpa-130440	Vicugna pacos	74.71	0.00e+00	804.00
IUUC-Vvi-131075	Vitis vinifera	45.64	7.00e-107	381.00
IUUC-Xtr-132713	Xenopus tropicalis	44.23	1.00e-93	337.00
IUUC-Xma-133002	Xiphophorus maculatus	93.96	0.00e+00	690.00
IUUC-Yli-134569	Yarrowia lipolytica	37.61	2.00e-80	293.00
IUUC-Zma-135799	Zea mays	41.98	3.00e-101	362.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence