iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	30.88	2.00e-03	37.00	IUUC-Sce-106376
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	30.88	2.00e-03	37.00	IUUC-Sce-106376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MYSLKDLCIQ VAQKHVHDID DIGDCPFELV KPILEKARPE HLIDLEEKSP HLKVDTQPLW 60
KDHVLRDFGL ELQKRTILNN IDDWRGLYGK LKKKRNAHYN VASAKLRSAY TKLEQSKQNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATATTCGC TACTGAGGTG TGCAGCCCTT CCGCGGCGTC ATTGGAACTT CCACTGGGCC 60
GGAAAGGCAA GAAGGATAAT TACGGTTTTT AACGTTGAAT ACGCAAATAT TTATAACGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010684--RNA_pol_II_trans_fac_SIII_A

Pfam

PF06881--Elongin_A

Gene Ontology

GO:0070449--C:elongin complex
GO:0016021--C:integral component of membrane
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006368--P:transcription elongation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001705	Ailuropoda melanoleuca	30.83	8.00e-10	57.00
IUUC-Apl-003659	Anas platyrhynchos	31.53	2.00e-11	62.80
IUUC-Aca-004513	Anolis carolinensis	29.41	5.00e-12	64.30
IUUC-Ago-007835	Ashbya gossypii	23.49	7.00e-09	52.40
IUUC-Acl-008085	Aspergillus clavatus	29.10	6.00e-09	53.10
IUUC-Afu-008931	Aspergillus fumigatus	29.63	8.00e-10	55.80
IUUC-Ani-009161	Aspergillus nidulans	33.06	1.00e-10	58.50
IUUC-Ang-009875	Aspergillus niger	31.43	4.00e-10	57.00
IUUC-Ame-011668	Astyanax mexicanus	38.03	1.00e-11	62.80
IUUC-Bta-013219	Bos taurus	27.34	8.00e-06	43.90
IUUC-Bci-014000	Botrytis cinerea	32.09	2.00e-12	64.70
IUUC-Bol-016438	Brassica oleracea	26.32	2.00e-06	44.70
IUUC-Bra-017526	Brassica rapa	26.90	3.00e-07	47.40
IUUC-Cel-018281	Caenorhabditis elegans	25.62	6.00e-07	46.60
IUUC-Cja-018759	Callithrix jacchus	29.17	5.00e-07	47.80
IUUC-Cfa-020766	Canis familiaris	30.83	1.00e-09	56.20
IUUC-Cpo-022250	Cavia porcellus	32.50	6.00e-11	60.80
IUUC-Csa-023293	Chlorocebus sabaeus	35.29	3.00e-08	52.00
IUUC-Cin-025556	Ciona intestinalis	33.58	1.00e-10	59.70
IUUC-Csv-026153	Ciona savignyi	29.88	4.00e-12	62.40
IUUC-Cgl-026733	Colletotrichum gloeosporioides	30.77	1.00e-07	48.90
IUUC-Cne-026936	Cryptococcus neoformans	33.59	1.00e-13	69.30
IUUC-Dre-027828	Danio rerio	28.06	2.00e-11	61.60
IUUC-Dse-031436	Dothistroma septosporum	33.33	1.00e-08	52.00
IUUC-Dme-031809	Drosophila melanogaster	29.91	6.00e-13	67.40
IUUC-Ete-032677	Echinops telfairi	30.00	3.00e-12	64.70
IUUC-Eca-034045	Equus caballus	26.83	5.00e-11	60.50
IUUC-Eeu-035063	Erinaceus europaeus	36.76	5.00e-09	54.30
IUUC-Fca-036488	Felis catus	30.00	3.00e-09	55.10
IUUC-Fal-037501	Ficedula albicollis	30.88	1.00e-12	66.20
IUUC-Fox-038013	Fusarium oxysporum	26.89	9.00e-05	39.30
IUUC-Fso-038123	Fusarium solani	27.97	2.00e-08	51.20
IUUC-Gmo-038614	Gadus morhua	30.00	2.00e-12	65.90
IUUC-Ggr-039793	Gaeumannomyces graminis	39.77	1.00e-11	62.00
IUUC-Gga-040738	Gallus gallus	31.82	2.00e-11	62.40
IUUC-Gac-041381	Gasterosteus aculeatus	27.50	3.00e-12	65.10
IUUC-Gma-042964	Glycine max	27.91	6.00e-08	48.90
IUUC-Ggo-045139	Gorilla gorilla	35.29	3.00e-08	52.00
IUUC-Hsa-046083	Homo sapiens	35.29	3.00e-08	52.00
IUUC-Itr-048970	Ictidomys tridecemlineatus	38.24	4.00e-09	54.70
IUUC-Kpa-049376	Komagataella pastoris	27.27	5.00e-09	52.80
IUUC-Lch-050369	Latimeria chalumnae	28.78	4.00e-13	67.80
IUUC-Loc-052347	Lepisosteus oculatus	29.71	4.00e-12	64.70
IUUC-Lma-053027	Leptosphaeria maculans	27.87	1.00e-03	35.00
IUUC-Laf-053575	Loxodonta africana	30.00	3.00e-09	55.50
IUUC-Mcc-054823	Macaca mulatta	35.29	3.00e-08	52.00
IUUC-Meu-056878	Macropus eugenii	34.23	2.00e-13	68.20
IUUC-Mor-056948	Magnaporthe oryzae	32.20	1.00e-10	58.90
IUUC-Mla-058917	Melampsora laricipopulina	33.80	3.00e-11	60.50
IUUC-Mga-059445	Meleagris gallopavo	31.82	2.00e-11	62.40
IUUC-Mmr-060665	Microcebus murinus	28.33	2.00e-08	52.80
IUUC-Mdo-062430	Monodelphis domestica	31.67	8.00e-13	67.00
IUUC-Mmu-064173	Mus musculus	29.17	1.00e-08	53.10
IUUC-Mac-065364	Musa acuminata	27.06	2.00e-10	57.00
IUUC-Mpu-066344	Mustela putorius furo	30.00	2.00e-09	56.20
IUUC-Mlu-068101	Myotis lucifugus	29.17	8.00e-09	53.90
IUUC-Nfi-068489	Neosartorya fischeri	29.63	1.00e-09	55.50
IUUC-Opr-070498	Ochotona princeps	26.55	1.00e-08	52.80
IUUC-Ont-071579	Oreochromis niloticus	33.80	7.00e-10	57.00
IUUC-Oan-072862	Ornithorhynchus anatinus	30.00	5.00e-12	64.30
IUUC-Ocu-073882	Oryctolagus cuniculus	29.17	4.00e-09	54.70
IUUC-Ola-086456	Oryzias latipes	30.83	3.00e-12	65.50
IUUC-Oga-087918	Otolemur garnettii	29.17	6.00e-09	54.30
IUUC-Oar-089663	Ovis aries	30.00	6.00e-12	63.90
IUUC-Ptr-091033	Pan troglodytes	35.29	3.00e-08	52.00
IUUC-Pan-092277	Papio anubis	35.29	3.00e-08	52.00
IUUC-Psi-094086	Pelodiscus sinensis	30.15	6.00e-13	67.40
IUUC-Pma-094683	Petromyzon marinus	32.43	6.00e-10	56.20
IUUC-Pno-094930	Phaeosphaeria nodorum	29.27	5.00e-09	53.10
IUUC-Pfo-097334	Poecilia formosa	30.00	2.00e-12	65.90
IUUC-Pab-098345	Pongo abelii	35.29	4.00e-08	51.60
IUUC-Pop-099683	Populus trichocarpa	29.66	2.00e-04	35.80
IUUC-Pca-100737	Procavia capensis	30.83	5.00e-09	54.70
IUUC-Pva-102497	Pteropus vampyrus	30.83	1.00e-09	56.60
IUUC-Pgr-103464	Puccinia graminis	32.35	2.00e-11	59.70
IUUC-Pte-104288	Pyrenophora teres	26.98	7.00e-07	45.80
IUUC-Pyt-104772	Pyrenophora triticirepentis	25.40	2.00e-06	43.90
IUUC-Rno-105177	Rattus norvegicus	29.17	1.00e-08	53.50
IUUC-Sce-106376	Saccharomyces cerevisiae	30.88	1.00e-04	38.90
IUUC-Sha-106480	Sarcophilus harrisii	31.67	1.00e-12	66.60
IUUC-Sja-107782	Schizosaccharomyces japonicus	60.25	1.00e-49	187.00
IUUC-Sar-113255	Sorex araneus	33.82	8.00e-08	50.40
IUUC-Sbi-114855	Sorghum bicolor	28.24	7.00e-07	45.80
IUUC-Sre-115076	Sporisorium reilianum	31.30	4.00e-14	70.90
IUUC-Ssc-115875	Sus scrofa	30.00	6.00e-12	64.30
IUUC-Tgu-117066	Taeniopygia guttata	30.88	1.00e-12	66.60
IUUC-Tru-117881	Takifugu rubripes	36.62	6.00e-11	60.50
IUUC-Tsy-119531	Tarsius syrichta	28.33	3.00e-10	58.50
IUUC-Tni-120325	Tetraodon nigroviridis	28.33	6.00e-13	67.40
IUUC-Tre-122105	Trichoderma reesei	34.21	6.00e-07	45.40
IUUC-Tvi-122542	Trichoderma virens	29.63	5.00e-09	52.40
IUUC-Tbe-127648	Tupaia belangeri	29.17	8.00e-09	53.50
IUUC-Ttr-129287	Tursiops truncatus	30.00	8.00e-12	63.90
IUUC-Uma-129543	Ustilago maydis	28.67	3.00e-12	65.10
IUUC-Vpa-130645	Vicugna pacos	27.50	1.00e-09	56.60
IUUC-Xtr-132709	Xenopus tropicalis	32.50	4.00e-13	68.20
IUUC-Xma-133858	Xiphophorus maculatus	30.00	2.00e-12	65.50
IUUC-Yli-134386	Yarrowia lipolytica	28.74	8.00e-15	72.40
IUUC-Zma-135412	Zea mays	25.78	1.00e-04	38.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence