iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028084

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 35-40

Genbank Nucleotide ID

AL844894

Gene Name

trim35-40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000042116.5	ENSDART00000061726.4	ENSDARP00000061725.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-11	45.0	10	77
E3 activity/RING/RING	5.30e-08	34.2	14	54

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawcee 71
           eef Cp+  +++++Pvvl +G+++ r +Ie++ + +++  cPv+rq++ e++   n tlr+l q++++ 
   Q: 10   EEFSCPVCRDVFTHPVVLTCGHSFCRGCIEEFWNFNKTrRCPVCRQTT-EREPSLNFTLRNLCQSFVNH 77
           79*****************************874444448******98.999999**********9875 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C++C++ f + p+vl CgH f++ C+ + w     + +k+ rCP+Cr
   Q: 14   CPVCRDVFTH-PVVLTCGHSFCRGCIeEFW-----NFNKTRRCPVCR 54
           ********99.999************6556.....7899999****8 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MASKRPFTEE EFSCPVCRDV FTHPVVLTCG HSFCRGCIEE FWNFNKTRRC PVCRQTTERE 60
PSLNFTLRNL CQSFVNHRRF LEEHCEVHQL RKTLVCCEDE QLMCEGCRDT EKHKNHTYRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTAAAAATG GCGTCTAAGC GTCCCTTTAC CGAAGAGGAG TTTTCTTGTC CGGTGTGCCG 60
CGATGTCTTC ACGCATCCCG TAGTGCTTAC CTGTGGGCAC AGCTTCTGCA GAGGGTGTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR003613--Ubox_domain
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00589--PRY
SM00184--RING
SM00449--SPRY
SM00504--Ubox

Gene Ontology

GO:0005622--C:intracellular
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

dre:334149

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018356	Caenorhabditis elegans	42.31	3.00e-12	64.70
IUUC-Dse-031398	Dothistroma septosporum	30.77	2.00e-10	60.80
IUUC-Kpa-049392	Komagataella pastoris	45.59	1.00e-13	70.50
IUUC-Mla-059052	Melampsora laricipopulina	36.23	3.00e-11	62.00
IUUC-Tme-126916	Tuber melanosporum	30.86	3.00e-10	60.80
IUUC-Vvi-131261	Vitis vinifera	42.86	6.00e-10	60.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence