iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095736

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545027

Gene Name

PHYPADRAFT_19743

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S138_30V6	PP1S138_30V6.1	PP1S138_30V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-07	32.5	303	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f   ++ +l lpC+H fh +Cl  w        ++ +CP+Cr
   Q: 303  CSVCLDKFitgQK-LLALPCNHKFHPNCLTPW------LEGHEQCPYCR 344
           ********66444.999***************......**********8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MLPGVEVARR RRMRAPAQRR ELDSPSTYQF SSSNFPIEGR RSRGNNSSGS SNLAHHHHLH 60
HHHHHHHYHH HVSRSASRNP AALSTQVRRL QDLLQEHRAA ASQQQNSNLS FSSSSSSREG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCTGCGCC CAGCTATCGC CATAGCCATC TCTGCCGACG CCCTTGAGCT TGGCCTAAAT 60
TTAGTGGAGG TGTGGCGAGG GAGTCTTAAG CGAGGGTACC TTCCTTTCTC GACCTTCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_19743

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003023	Amborella trichopoda	42.86	7.00e-17	80.10
IUUC-Aly-006225	Arabidopsis lyrata	42.31	4.00e-17	80.50
IUUC-Ath-007567	Arabidopsis thaliana	55.10	6.00e-15	73.20
IUUC-Bdi-014868	Brachypodium distachyon	41.89	2.00e-14	71.60
IUUC-Bol-015528	Brassica oleracea	41.03	2.00e-16	78.20
IUUC-Bra-016749	Brassica rapa	40.00	6.00e-16	76.60
IUUC-Cel-018118	Caenorhabditis elegans	39.08	2.00e-13	69.70
IUUC-Hvu-047572	Hordeum vulgare	41.89	3.00e-14	70.90
IUUC-Mtr-058785	Medicago truncatula	47.19	8.00e-18	82.40
IUUC-Mac-064949	Musa acuminata	38.16	6.00e-14	70.50
IUUC-Oba-075788	Oryza barthii	39.02	1.00e-15	75.90
IUUC-Obr-076821	Oryza brachyantha	41.77	2.00e-15	74.70
IUUC-Ogl-077650	Oryza glaberrima	39.02	1.00e-15	75.90
IUUC-Ogu-077952	Oryza glumaepatula	45.45	6.00e-15	73.90
IUUC-Oin-079751	Oryza indica	39.02	8.00e-16	76.30
IUUC-Olo-080497	Oryza longistaminata	41.77	3.00e-15	74.30
IUUC-Ome-081103	Oryza meridionalis	39.02	3.00e-15	75.10
IUUC-Oni-082573	Oryza nivara	39.02	8.00e-16	76.30
IUUC-Opu-083625	Oryza punctata	35.80	5.00e-15	73.60
IUUC-Oru-084894	Oryza rufipogon	39.02	8.00e-16	76.30
IUUC-Osa-086183	Oryza sativa	39.02	8.00e-16	76.30
IUUC-Pop-099358	Populus trichocarpa	37.35	2.00e-14	72.00
IUUC-Ppe-101691	Prunus persica	36.67	4.00e-15	74.30
IUUC-Pgr-103374	Puccinia graminis	34.94	9.00e-11	58.90
IUUC-Ptt-103976	Puccinia triticina	32.50	2.00e-10	58.50
IUUC-Smo-109484	Selaginella moellendorffii	59.76	2.00e-25	105.00
IUUC-Sbi-113825	Sorghum bicolor	42.86	3.00e-14	71.20
IUUC-Tae-124401	Triticum aestivum	41.89	3.00e-14	71.60
IUUC-Vvi-131679	Vitis vinifera	37.80	1.00e-15	76.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence