iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007221

Ensembl Protein ID

AT3G27930.2

UniProt Accession

F4IXS2; F4IXS2_ARATH

Genbank Protein ID

AEE77383.1

Protein Name

Beta-galactosidase

Genbank Nucleotide ID

CP002686

Gene Name

At3g27930

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G27930	AT3G27930.1	AT3G27930.1
AT3G27930	AT3G27930.3	AT3G27930.3
AT3G27930	AT3G27930.2	AT3G27930.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	30.88	2.20e-01	33.50	IUUC-Cel-018324

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGNALVKKEP PPPVVLVPPL FDYPPLSART RMLESSYNLL FGKLALRCLF EDYFEEANRF 60
TGKFLLKPTD DPHVDLVASV SGAVDGRVEG DFVGNAEFRW QSDVDDPHTF VDLSVSTSNP 120

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Nucleotide Sequence
(Fasta)

GAAATATTCA AACGTGAAGC AAAAGCAGAA GCGAGACTAT CGCCGAGAGC TCTCACTAAC 60
TATTGAATTC ATCGAAGAAG CTCTCTCGTT GTCGCAGAAT CTCTTCTTCT CCGTTCTAGA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR023614--Porin_dom

KEGG

ath:AT3G27930

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011699	Astyanax mexicanus	20.51	4.10e-01	30.40
IUUC-Cel-018324	Caenorhabditis elegans	30.88	1.20e-02	33.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence