iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pan-092519

Ensembl Protein ID

ENSPANP00000016746.1

UniProt Accession

B0CM83; B0CM83_PAPAN

Genbank Protein ID

ABY64675.1

Protein Name

RNA binding motif protein 12 (Predicted)

Genbank Nucleotide ID

AHZZ01051316

Gene Name

RBM12

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPANG00000020003.1	ENSPANT00000011812.1	ENSPANP00000016746.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	28.77	4.00e-27	115.00	IUUC-Ots-000026
E3 activity/RING/RING	32.00	6.00e-27	114.00	IUUC-Ots-000013

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Papio anubis

Protein Sequence
(Fasta)

MAVVIRLQGL PIVAGTMDIR HFFSGLTIPD GGVHIVGGEL GEAFIVFATD EDARLGMMRT 60
GGTIKGSKVT LLLSSKTEMQ NMIELSRRRF ETANLDIPPA NASRSGPPPS SGMSGRVNLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGTGG TCATCCGTTT GCAAGGTCTC CCAATTGTGG CGGGGACCAT GGACATTCGC 60
CACTTCTTCT CTGGATTGAC CATTCCTGAT GGGGGCGTGC ATATTGTAGG GGGTGAACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000008--C2_dom
IPR010734--Copine
IPR012677--Nucleotide-bd_a/b_plait
IPR034591--RBM12_RRM1
IPR034594--RBM12_RRM2
IPR000504--RRM_dom
IPR002035--VWF_A

PROSITE

PS50004--C2
PS50102--RRM

Pfam

PF00168--C2
PF07002--Copine
PF00076--RRM_1

SMART

SM00239--C2
SM00360--RRM
SM00327--VWA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000336	Aegilops tauschii	35.37	2.00e-25	110.00
IUUC-Aml-002030	Ailuropoda melanoleuca	93.05	0.00e+00	1023.00
IUUC-Atr-003148	Amborella trichopoda	31.21	2.00e-23	103.00
IUUC-Apl-003690	Anas platyrhynchos	70.78	0.00e+00	785.00
IUUC-Aca-005177	Anolis carolinensis	74.07	0.00e+00	850.00
IUUC-Aly-006212	Arabidopsis lyrata	30.13	2.00e-27	117.00
IUUC-Ath-007080	Arabidopsis thaliana	30.46	8.00e-29	121.00
IUUC-Ang-009660	Aspergillus niger	28.92	1.90e-01	31.60
IUUC-Ame-011404	Astyanax mexicanus	47.48	8.00e-118	417.00
IUUC-Bta-012757	Bos taurus	51.52	7.00e-151	527.00
IUUC-Bdi-014521	Brachypodium distachyon	33.95	3.00e-26	112.00
IUUC-Bol-016568	Brassica oleracea	30.72	4.00e-28	119.00
IUUC-Bra-017730	Brassica rapa	31.05	1.00e-28	120.00
IUUC-Cel-018357	Caenorhabditis elegans	28.81	6.00e-21	99.40
IUUC-Cja-019806	Callithrix jacchus	97.21	0.00e+00	1098.00
IUUC-Cfa-020719	Canis familiaris	93.44	0.00e+00	1028.00
IUUC-Cpo-022547	Cavia porcellus	91.49	0.00e+00	1173.00
IUUC-Cre-022882	Chlamydomonas reinhardtii	31.96	6.00e-20	90.90
IUUC-Csa-023455	Chlorocebus sabaeus	99.63	0.00e+00	1121.00
IUUC-Cho-024698	Choloepus hoffmanni	56.91	4.00e-179	620.00
IUUC-Cin-025331	Ciona intestinalis	29.60	3.00e-18	85.50
IUUC-Csv-026082	Ciona savignyi	31.25	3.00e-20	91.70
IUUC-Dre-027464	Danio rerio	49.45	7.00e-151	527.00
IUUC-Dno-029223	Dasypus novemcinctus	90.49	0.00e+00	932.00
IUUC-Dor-030419	Dipodomys ordii	50.99	8.00e-118	417.00
IUUC-Ete-032325	Echinops telfairi	40.22	3.00e-98	352.00
IUUC-Eca-034145	Equus caballus	50.45	5.00e-152	531.00
IUUC-Eeu-034962	Erinaceus europaeus	66.09	0.00e+00	724.00
IUUC-Fca-035987	Felis catus	94.98	0.00e+00	1048.00
IUUC-Fal-036712	Ficedula albicollis	71.35	0.00e+00	805.00
IUUC-Gmo-038771	Gadus morhua	55.76	2.00e-85	310.00
IUUC-Gga-040253	Gallus gallus	73.41	0.00e+00	853.00
IUUC-Gac-042313	Gasterosteus aculeatus	49.55	4.00e-147	514.00
IUUC-Gma-043577	Glycine max	31.85	2.00e-28	120.00
IUUC-Ggo-045589	Gorilla gorilla	97.58	0.00e+00	1094.00
IUUC-Hsa-046724	Homo sapiens	97.57	0.00e+00	1083.00
IUUC-Hvu-047606	Hordeum vulgare	33.58	1.00e-25	110.00
IUUC-Itr-048186	Ictidomys tridecemlineatus	48.38	2.00e-143	502.00
IUUC-Lch-049873	Latimeria chalumnae	49.76	2.00e-114	405.00
IUUC-Lpe-051660	Leersia perrieri	29.87	1.00e-23	104.00
IUUC-Loc-052575	Lepisosteus oculatus	51.90	7.00e-152	530.00
IUUC-Laf-054417	Loxodonta africana	94.79	0.00e+00	1040.00
IUUC-Mcc-055340	Macaca mulatta	98.89	0.00e+00	1121.00
IUUC-Meu-056765	Macropus eugenii	49.29	7.00e-92	331.00
IUUC-Mtr-058065	Medicago truncatula	32.23	3.00e-26	113.00
IUUC-Mla-059036	Melampsora laricipopulina	33.33	1.00e-04	41.60
IUUC-Mga-059862	Meleagris gallopavo	73.47	0.00e+00	785.00
IUUC-Mmr-061707	Microcebus murinus	94.34	0.00e+00	1028.00
IUUC-Mdo-061966	Monodelphis domestica	80.34	0.00e+00	872.00
IUUC-Mmu-064072	Mus musculus	91.43	0.00e+00	1004.00
IUUC-Mac-065151	Musa acuminata	32.35	3.00e-26	112.00
IUUC-Mpu-065680	Mustela putorius furo	92.86	0.00e+00	1026.00
IUUC-Mlu-067845	Myotis lucifugus	53.90	7.00e-83	300.00
IUUC-Nfi-068401	Neosartorya fischeri	56.25	2.90e+00	26.90
IUUC-Nle-069867	Nomascus leucogenys	98.51	0.00e+00	1103.00
IUUC-Opr-070639	Ochotona princeps	54.58	4.00e-72	265.00
IUUC-Ont-071744	Oreochromis niloticus	47.30	6.00e-148	517.00
IUUC-Oan-073203	Ornithorhynchus anatinus	52.80	3.00e-119	422.00
IUUC-Ocu-074096	Oryctolagus cuniculus	94.40	0.00e+00	1036.00
IUUC-Oba-075646	Oryza barthii	32.01	2.00e-25	110.00
IUUC-Obr-076544	Oryza brachyantha	34.96	7.00e-27	114.00
IUUC-Ogl-077518	Oryza glaberrima	34.15	1.00e-25	111.00
IUUC-Ogu-078761	Oryza glumaepatula	32.01	2.00e-25	109.00
IUUC-Oin-079486	Oryza indica	32.37	1.00e-25	110.00
IUUC-Olo-080405	Oryza longistaminata	32.97	1.00e-25	110.00
IUUC-Ome-081659	Oryza meridionalis	32.60	1.00e-25	111.00
IUUC-Oni-082777	Oryza nivara	32.37	1.00e-25	110.00
IUUC-Opu-083235	Oryza punctata	32.60	4.00e-26	112.00
IUUC-Oru-084281	Oryza rufipogon	32.37	1.00e-25	110.00
IUUC-Osa-085996	Oryza sativa	32.37	1.00e-25	110.00
IUUC-Ola-087558	Oryzias latipes	52.97	3.00e-116	411.00
IUUC-Oga-088715	Otolemur garnettii	94.43	0.00e+00	1173.00
IUUC-Oar-089570	Ovis aries	66.17	0.00e+00	732.00
IUUC-Ptr-090898	Pan troglodytes	97.95	0.00e+00	696.00
IUUC-Psi-093065	Pelodiscus sinensis	73.62	0.00e+00	816.00
IUUC-Pma-094267	Petromyzon marinus	54.89	1.00e-171	596.00
IUUC-Ppa-095320	Physcomitrella patens	33.60	1.00e-23	104.00
IUUC-Pfo-097293	Poecilia formosa	66.67	0.00e+00	679.00
IUUC-Pab-098607	Pongo abelii	53.92	8.00e-91	327.00
IUUC-Pop-099752	Populus trichocarpa	33.87	4.00e-27	115.00
IUUC-Pca-100224	Procavia capensis	62.08	0.00e+00	688.00
IUUC-Ppe-101655	Prunus persica	32.60	4.00e-26	112.00
IUUC-Pva-102684	Pteropus vampyrus	47.06	2.00e-132	466.00
IUUC-Rno-104855	Rattus norvegicus	92.37	0.00e+00	993.00
IUUC-Sha-106541	Sarcophilus harrisii	48.20	6.00e-144	504.00
IUUC-Smo-108807	Selaginella moellendorffii	33.60	9.00e-25	107.00
IUUC-Sit-110666	Setaria italica	33.70	4.00e-26	112.00
IUUC-Sly-111212	Solanum lycopersicum	31.50	2.00e-27	116.00
IUUC-Stu-111981	Solanum tuberosum	32.23	2.00e-27	117.00
IUUC-Sar-113010	Sorex araneus	62.64	0.00e+00	681.00
IUUC-Sbi-114268	Sorghum bicolor	32.97	6.00e-27	115.00
IUUC-Ssc-115580	Sus scrofa	95.75	0.00e+00	1014.00
IUUC-Tgu-117459	Taeniopygia guttata	49.91	3.00e-148	518.00
IUUC-Tru-118245	Takifugu rubripes	66.92	0.00e+00	697.00
IUUC-Tsy-119089	Tarsius syrichta	65.31	0.00e+00	731.00
IUUC-Tni-119926	Tetraodon nigroviridis	50.85	2.00e-148	518.00
IUUC-Tca-121637	Theobroma cacao	32.05	3.00e-29	122.00
IUUC-Tae-123953	Triticum aestivum	35.37	1.00e-25	110.00
IUUC-Tur-126574	Triticum urartu	35.37	2.00e-25	109.00
IUUC-Tbe-127814	Tupaia belangeri	48.14	2.00e-96	346.00
IUUC-Ttr-128567	Tursiops truncatus	48.38	6.00e-140	491.00
IUUC-Vpa-130269	Vicugna pacos	47.76	1.00e-138	486.00
IUUC-Vvi-131538	Vitis vinifera	31.11	7.00e-26	111.00
IUUC-Xtr-132921	Xenopus tropicalis	58.32	0.00e+00	649.00
IUUC-Xma-133656	Xiphophorus maculatus	64.61	0.00e+00	717.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence