iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114669

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G199100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g024780	Sb10g024780.1	Sb10g024780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-07	31.2	227	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e +++g     lpCgH++h  C+  w         + +CP+Cr
   Q: 227  CAVCKEGMEQGelATGLPCGHFYHGACIGPW------LAIRNTCPVCR 268
           ********8874433399*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MADFDDELFL DVGDDGFGDL SYVSFSESIE LDLDCPRHVL SPGFDPETLT PTPGSPISFD 60
SDPDLRGLSP SLTRSPPFWD CLEDDAASFE WEEIADAAPG VGSGGGGGGG GGGGVGGGGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGCGTCACA CTGCAACGGC CGCCGCACCA CCACCACCAC CACGGCACCA CCCTACCCAA 60
TCCCCATCCC CACCGCCGGG CGGCGCTGCC TCCCATGGCG GACTTCGACG ACGAGCTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g024780

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014615	Brachypodium distachyon	61.64	3.00e-78	284.00
IUUC-Cel-018227	Caenorhabditis elegans	36.73	1.00e-10	60.10
IUUC-Hvu-047424	Hordeum vulgare	57.61	6.00e-63	233.00
IUUC-Lpe-051174	Leersia perrieri	49.77	1.00e-31	129.00
IUUC-Obr-076842	Oryza brachyantha	55.00	8.00e-44	169.00
IUUC-Ogl-077489	Oryza glaberrima	59.76	3.00e-35	141.00
IUUC-Ogu-078040	Oryza glumaepatula	60.16	2.00e-35	141.00
IUUC-Oin-080193	Oryza indica	56.91	8.00e-40	156.00
IUUC-Ome-081280	Oryza meridionalis	62.32	8.00e-32	130.00
IUUC-Oni-082898	Oryza nivara	60.16	3.00e-35	141.00
IUUC-Opu-083151	Oryza punctata	65.25	1.00e-33	134.00
IUUC-Oru-084385	Oryza rufipogon	60.16	3.00e-35	141.00
IUUC-Osa-086074	Oryza sativa	63.20	2.00e-29	119.00
IUUC-Sit-110138	Setaria italica	74.06	3.00e-61	227.00
IUUC-Tur-126182	Triticum urartu	84.04	3.00e-36	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence