iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000007030.1	ENSPSIT00000007870.1	ENSPSIP00000007829.1
ENSPSIG00000007030.1	ENSPSIT00000007877.1	ENSPSIP00000007836.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.10e-15	55.7	326	374

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           k+C +Cg +++d+ +l+ C++C++ +H  Cl+++v+e+ ++s  w C  Cr+
   Q: 326  KSCSLCGTSENDD-QLLFCDDCDRGYHMYCLNPPVSEPPEGS--WSCHLCRE 374
           78********987.7*******************66665555..******86 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

SRDIYFPILK GLGDQFYKEA IEHCRSYNSR LCAERSVRLP FLDSQTGVAQ NNCYIWMEKR 60
HRGPGLAPGQ LYTYPARCWR KKRRLHPPED SRLKLLEIKP EVDLPLKKDG FTSEGTTLEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGATTGA GGTAAGCTAA ATCATAGAAG GCAGCTCTAA ACCAAAAGAA CTATTCCCAA 60
AAGGGAGTAG CACTAATTTA ACCAAATGGA TCTTGTTAAT TTGGTATAAT TTCCTTGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR023413--GFP-like
IPR025750--Requiem/DPF_N_dom
IPR013087--Znf_C2H2_type
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00628--PHD
PF14051--Requiem_N

SMART

SM00249--PHD
SM00355--ZnF_C2H2

Gene Ontology

GO:0071565--C:nBAF complex
GO:0005654--C:nucleoplasm
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding
GO:0007399--P:nervous system development

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001805	Ailuropoda melanoleuca	83.50	2.00e-177	614.00
IUUC-Apl-003424	Anas platyrhynchos	94.99	0.00e+00	661.00
IUUC-Aca-005022	Anolis carolinensis	93.12	0.00e+00	655.00
IUUC-Ame-011868	Astyanax mexicanus	67.09	1.00e-133	469.00
IUUC-Bta-013164	Bos taurus	88.39	2.00e-180	624.00
IUUC-Cel-018182	Caenorhabditis elegans	31.04	4.00e-47	181.00
IUUC-Cja-019565	Callithrix jacchus	88.92	0.00e+00	628.00
IUUC-Cpo-021757	Cavia porcellus	89.45	0.00e+00	629.00
IUUC-Csa-024262	Chlorocebus sabaeus	87.31	4.00e-147	513.00
IUUC-Cin-025528	Ciona intestinalis	41.69	1.00e-80	293.00
IUUC-Cne-026801	Cryptococcus neoformans	51.82	3.00e-32	133.00
IUUC-Dre-028390	Danio rerio	67.60	2.00e-138	485.00
IUUC-Dno-029041	Dasypus novemcinctus	65.21	2.00e-128	451.00
IUUC-Ete-032515	Echinops telfairi	62.53	1.00e-120	426.00
IUUC-Eca-034251	Equus caballus	88.92	0.00e+00	628.00
IUUC-Fca-036522	Felis catus	84.22	4.00e-171	593.00
IUUC-Fal-036898	Ficedula albicollis	94.68	0.00e+00	655.00
IUUC-Gmo-039263	Gadus morhua	62.28	4.00e-128	450.00
IUUC-Gga-041265	Gallus gallus	79.00	0.00e+00	629.00
IUUC-Gac-042351	Gasterosteus aculeatus	67.37	2.00e-140	491.00
IUUC-Ggo-045528	Gorilla gorilla	85.64	1.00e-177	615.00
IUUC-Hsa-046855	Homo sapiens	88.92	0.00e+00	628.00
IUUC-Itr-048666	Ictidomys tridecemlineatus	62.47	2.00e-131	461.00
IUUC-Lch-049484	Latimeria chalumnae	56.29	7.00e-88	316.00
IUUC-Loc-052830	Lepisosteus oculatus	72.55	7.00e-143	499.00
IUUC-Laf-053772	Loxodonta africana	76.42	4.00e-171	593.00
IUUC-Mcc-054671	Macaca mulatta	89.10	3.00e-180	624.00
IUUC-Mga-059248	Meleagris gallopavo	77.73	1.00e-178	618.00
IUUC-Mvi-060531	Microbotryum violaceum	45.45	5.00e-26	113.00
IUUC-Mmr-061299	Microcebus murinus	88.65	0.00e+00	627.00
IUUC-Mdo-061983	Monodelphis domestica	88.48	0.00e+00	630.00
IUUC-Mmu-063734	Mus musculus	88.65	0.00e+00	625.00
IUUC-Mpu-066235	Mustela putorius furo	88.30	2.00e-178	617.00
IUUC-Mlu-067198	Myotis lucifugus	84.40	2.00e-172	598.00
IUUC-Ont-072320	Oreochromis niloticus	66.49	2.00e-140	491.00
IUUC-Oga-088159	Otolemur garnettii	75.81	1.00e-172	599.00
IUUC-Oar-090218	Ovis aries	87.27	0.00e+00	626.00
IUUC-Pan-092749	Papio anubis	88.92	0.00e+00	628.00
IUUC-Pfo-096233	Poecilia formosa	66.76	6.00e-141	493.00
IUUC-Pab-098560	Pongo abelii	65.30	5.00e-129	453.00
IUUC-Pca-100612	Procavia capensis	50.87	3.00e-61	228.00
IUUC-Rno-105001	Rattus norvegicus	65.82	1.00e-131	462.00
IUUC-Ssc-115701	Sus scrofa	64.72	4.00e-129	454.00
IUUC-Tgu-117306	Taeniopygia guttata	93.67	0.00e+00	650.00
IUUC-Tru-118192	Takifugu rubripes	57.67	1.00e-131	462.00
IUUC-Tni-120874	Tetraodon nigroviridis	65.18	2.00e-122	432.00
IUUC-Uma-129445	Ustilago maydis	48.08	3.00e-27	117.00
IUUC-Xtr-131937	Xenopus tropicalis	72.77	6.00e-150	523.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence