iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050638

Ensembl Protein ID

ENSLACP00000021534.1

UniProt Accession

H3BI13; H3BI13_LATCH

Genbank Protein ID

ENSLACP00000021534

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01004586

Gene Name

TRIM50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000018923.1	ENSLACT00000021675.1	ENSLACP00000021534.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-09	37.5	16	57
E3 activity/RING/U-box	2.60e-07	30.8	12	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle fk+ pl l+CgH ++++Cl  +   + +  ++ +CP+Cr
   Q: 16   CPICLEVFKE-PLMLQCGHSYCKSCLTSL---SGELEGQVLCPVCR 57
           ********99.999************666...8889*********8 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPnltlrrliqa 67
           +++lCpI le++++P +l++G++y +s++       +g+  cPv+r++++ ++  Pn +l r+i+a
   Q: 12   DQLLCPICLEVFKEPLMLQCGHSYCKSCLTSLSgeLEGQVLCPVCRKEVDFNTSPPNVSLARIIEA 77
           789**************************99545444444********************999986 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MARRMSLPEL EDQLLCPICL EVFKEPLMLQ CGHSYCKSCL TSLSGELEGQ VLCPVCRKEV 60
DFNTSPPNVS LARIIEALQT LGDADTDQES CPEHNNPLSL YCEKDQEVIC GLCGIIGTHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCGGA GGATGAGTTT ACCAGAGCTG GAAGACCAGC TCTTGTGTCC AATCTGTTTG 60
GAGGTCTTTA AAGAGCCGCT GATGCTGCAG TGCGGCCACT CCTACTGCAA GTCCTGCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

lcm:102359535

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001406	Ailuropoda melanoleuca	56.65	3.00e-169	588.00
IUUC-Apl-004051	Anas platyrhynchos	64.01	0.00e+00	638.00
IUUC-Aca-004755	Anolis carolinensis	34.48	2.00e-83	302.00
IUUC-Acl-008377	Aspergillus clavatus	22.81	1.00e-08	53.90
IUUC-Ame-010964	Astyanax mexicanus	61.41	2.00e-176	612.00
IUUC-Bta-012642	Bos taurus	55.58	3.00e-168	584.00
IUUC-Cel-018397	Caenorhabditis elegans	36.84	1.00e-08	55.10
IUUC-Cja-019011	Callithrix jacchus	54.72	1.00e-153	536.00
IUUC-Cfa-020270	Canis familiaris	55.79	3.00e-167	581.00
IUUC-Cpo-022458	Cavia porcellus	56.96	3.00e-168	584.00
IUUC-Csa-023478	Chlorocebus sabaeus	56.53	3.00e-168	584.00
IUUC-Dno-028894	Dasypus novemcinctus	55.58	4.00e-166	577.00
IUUC-Dor-030228	Dipodomys ordii	53.43	4.00e-144	504.00
IUUC-Eca-033497	Equus caballus	56.44	2.00e-169	588.00
IUUC-Eeu-034910	Erinaceus europaeus	44.48	1.00e-80	292.00
IUUC-Fca-036164	Felis catus	56.65	2.00e-171	594.00
IUUC-Gga-040573	Gallus gallus	54.52	3.00e-110	392.00
IUUC-Ggo-044471	Gorilla gorilla	56.65	2.00e-168	585.00
IUUC-Hsa-046039	Homo sapiens	56.65	4.00e-169	587.00
IUUC-Itr-048897	Ictidomys tridecemlineatus	54.43	4.00e-162	564.00
IUUC-Kpa-049137	Komagataella pastoris	39.73	9.00e-09	54.70
IUUC-Loc-051971	Lepisosteus oculatus	61.49	3.00e-176	611.00
IUUC-Laf-054291	Loxodonta africana	54.94	7.00e-163	566.00
IUUC-Mcc-055708	Macaca mulatta	55.67	4.00e-166	577.00
IUUC-Meu-056670	Macropus eugenii	50.57	4.00e-103	368.00
IUUC-Mga-059415	Meleagris gallopavo	63.58	0.00e+00	638.00
IUUC-Mmr-061410	Microcebus murinus	55.58	2.00e-161	561.00
IUUC-Mdo-062252	Monodelphis domestica	33.12	6.00e-80	291.00
IUUC-Mmu-064094	Mus musculus	56.01	8.00e-167	579.00
IUUC-Mpu-065781	Mustela putorius furo	56.01	3.00e-167	581.00
IUUC-Mlu-067974	Myotis lucifugus	55.79	1.00e-166	579.00
IUUC-Nle-069000	Nomascus leucogenys	56.65	2.00e-169	588.00
IUUC-Opr-071216	Ochotona princeps	57.94	3.00e-78	285.00
IUUC-Oan-072738	Ornithorhynchus anatinus	32.83	2.00e-77	283.00
IUUC-Ocu-074859	Oryctolagus cuniculus	54.51	1.00e-165	575.00
IUUC-Oga-088285	Otolemur garnettii	55.58	5.00e-165	573.00
IUUC-Oar-090161	Ovis aries	49.68	6.00e-144	503.00
IUUC-Ptr-091672	Pan troglodytes	56.87	2.00e-169	588.00
IUUC-Pan-092870	Papio anubis	56.10	7.00e-167	580.00
IUUC-Psi-093742	Pelodiscus sinensis	64.81	0.00e+00	654.00
IUUC-Pab-098034	Pongo abelii	56.44	9.00e-169	586.00
IUUC-Pca-100618	Procavia capensis	29.89	3.00e-68	252.00
IUUC-Pva-103234	Pteropus vampyrus	55.79	1.00e-167	582.00
IUUC-Rno-105163	Rattus norvegicus	55.79	2.00e-162	565.00
IUUC-Sha-106575	Sarcophilus harrisii	47.53	2.00e-117	416.00
IUUC-Ssc-115600	Sus scrofa	56.44	1.00e-167	582.00
IUUC-Tbe-128151	Tupaia belangeri	61.83	2.00e-69	254.00
IUUC-Ttr-128947	Tursiops truncatus	56.03	1.00e-166	578.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence